RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TRIM43BA6NCK2 446 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 LOC730098B7Z3J9 87 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 CLIC1O00299 241 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 CFIP05156 583 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 C1GALT1C1LP0DN25 315 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 DNAJA1P31689 397 aaKnown RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 DCP2Q8IU60 420 aaKnown RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 STRADBQ9C0K7 418 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 ZBTB26Q9HCK0 441 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 CLCA3PQ9Y6N3 262 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 ZBTB42B2RXF5 422 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 RCVRNP35243 200 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 RBBP4Q09028 425 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 Q6ZVL8 140 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 C12orf40Q86WS4 652 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 FAM47BQ8NA70 645 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 TMIEQ8NEW7 156 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 OR8J3Q8NGG0 315 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 KLK6Q92876 244 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 PRODH2Q9UF12 536 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 SH3GLB1Q9Y371 365 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 ARAP2Q8WZ64 1704 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 RFPL1O75677 317 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 FADS2O95864 444 aaKnown RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 AK1P00568 194 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 IL12AP29459 219 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 RABIFP47224 123 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF846Q147U1 533 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 HACD2Q6Y1H2 254 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 CADM2Q8N3J6 435 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 BBS10Q8TAM1 723 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 ZUFSPQ96AP4 578 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 DGCR14Q96DF8 476 aaKnown RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 ZNF317Q96PQ6 595 aaPredicted RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 RSPH9Q9H1X1 276 aaPredicted RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 PELI2Q9HAT8 420 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 ACTR3BQ9P1U1 418 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 RPL36Q9Y3U8 105 aaKnown RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 TCRBV21S2A2A0A5A6 115 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 S100GP29377 79 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 CLCN7P51798 805 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 RPS15AP62244 130 aaKnown RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 CST6Q15828 149 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 PUS10Q3MIT2 529 aaKnown RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 LRRC73Q5JTD7 316 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 SCD5Q86SK9 330 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 ZFAND4Q86XD8 727 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 MAPKAP1Q9BPZ7 522 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 GORASP1Q9BQQ3 440 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 C12orf65Q9H3J6 166 aaKnown RBP11.09□□□□□ -0.63
COL4A5-201ENST00000328300 POFUT2Q9Y2G5 429 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 KCTD3Q9Y597 815 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 UGDHO60701 494 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 KLHL12Q53G59 568 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 NRROSQ86YC3 692 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 GALPQ9UBC7 116 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 FZD4Q9ULV1 537 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 TMEM5Q9Y2B1 443 aa11.09□□□□□ -0.63
COL4A5-201ENST00000328300 DFNA5O60443 496 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 PGM3O95394 542 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 MYBPC1Q00872 1141 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 PAMR1Q6UXH9 720 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 PAAF1Q9BRP4 392 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 OBP2AQ9NY56 170 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 BTBD3Q9Y2F9 522 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 SEC24AO95486 1093 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 SERPINA3P01011 423 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 JUPP14923 745 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 CSTF2P33240 577 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 FAUP35544 74 aaKnown RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 CDH12P55289 794 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 DSC1Q08554 894 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 SIX1Q15475 284 aaPredicted RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 DECR1Q16698 335 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 ZSWIM7Q19AV6 140 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 CST9Q5W186 159 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 TMCO2Q7Z6W1 182 aaPredicted RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 KBTBD2Q8IY47 623 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 FBXO15Q8NCQ5 510 aaPredicted RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 OR4C6Q8NH72 309 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 LMX1AQ8TE12 382 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 OR5P2Q8WZ92 322 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 THRSPQ92748 146 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 CHID1Q9BWS9 393 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 TAS2R1Q9NYW7 299 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 UTS2RQ9UKP6 389 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 PACSIN3Q9UKS6 424 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 DRD2P14416 443 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 UQCRC2P22695 453 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 FADDQ13158 208 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 DGCR6Q14129 220 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 DPPA4Q7L190 304 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 ADAM7Q9H2U9 754 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 MRPL39Q9NYK5 338 aaKnown RBP11.08□□□□□ -0.64
COL4A5-201ENST00000328300 RENP00797 406 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 ATG9BQ674R7 924 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 DNM1P34Q6PK57 102 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 RANBP10Q6VN20 620 aa11.08□□□□□ -0.64
COL4A5-201ENST00000328300 NANOGNBQ7Z5D8 188 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms