RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 MAD2L1Q13257 205 aaPredicted RBP17.74■□□□□ 0.43
USP39-201ENST00000323701 ZNF542PQ5EBM4 170 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 LCTLQ6UWM7 567 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 RNF111Q6ZNA4 994 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 FAM129CQ86XR2 697 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 MAGEB10Q96LZ2 347 aaPredicted RBP17.74■□□□□ 0.43
USP39-201ENST00000323701 SERPINI1Q99574 410 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 DPY30Q9C005 99 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 CLMPQ9H6B4 373 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 FBXL21Q9UKT6 434 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 DNAJA2O60884 412 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 RPSAP08865 295 aaKnown RBP17.74■□□□□ 0.43
USP39-201ENST00000323701 SESN3P58005 492 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 SRP54P61011 504 aaKnown RBP17.74■□□□□ 0.43
USP39-201ENST00000323701 NFYCQ13952 458 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 ARHGAP19Q14CB8 494 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 COQ5Q5HYK3 327 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 C6orf163Q5TEZ5 329 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 CROCCQ5TZA2 2017 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 DLEU7Q6UYE1 221 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 ABI3BPQ7Z7G0 1075 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 NRROSQ86YC3 692 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 HID1Q8IV36 788 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 SFTPA2Q8IWL1 248 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 LAS2Q8IYD9 372 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 SYNPOQ8N3V7 929 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 OR52E1Q8NGJ3 308 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 SETD7Q8WTS6 366 aaKnown RBP17.74■□□□□ 0.43
USP39-201ENST00000323701 STMN2Q93045 179 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 FCRL1Q96LA6 429 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 TMEM74Q96NL1 305 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 EHD1Q9H4M9 534 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 ICKQ9UPZ9 632 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 SNRNP200O75643 2136 aaKnown RBP17.74■□□□□ 0.43
USP39-201ENST00000323701 HEATR5BQ9P2D3 2071 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 LRP4O75096 1905 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 IGHV1OR15-9A0A0B4J2B8 117 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 SAP18O00422 153 aaKnown RBP17.73■□□□□ 0.43
USP39-201ENST00000323701 TRIM38O00635 465 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 RASGRP1O95267 797 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 TBX6O95947 436 aaPredicted RBP17.73■□□□□ 0.43
USP39-201ENST00000323701 HTR1BP28222 390 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 CD6P30203 668 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 ADHFE1Q8IWW8 467 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 MINDY1Q8N5J2 469 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 C1orf52Q8N6N3 182 aaKnown RBP17.73■□□□□ 0.43
USP39-201ENST00000323701 GPR156Q8NFN8 814 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 SLC26A7Q8TE54 656 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 NRG4Q8WWG1 115 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 EFCAB11Q9BUY7 163 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 ZNF624Q9P2J8 865 aaPredicted RBP17.73■□□□□ 0.43
USP39-201ENST00000323701 ABCD2Q9UBJ2 740 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 WNT16Q9UBV4 365 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 LEF1Q9UJU2 399 aaPredicted RBP17.73■□□□□ 0.43
USP39-201ENST00000323701 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.73■□□□□ 0.43
USP39-201ENST00000323701 HS3ST3A1Q9Y663 406 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 DMDP11532 3685 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 FANCMQ8IYD8 2048 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 IGKV1-8A0A0C4DH67 115 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 LRRC32Q14392 662 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 CCDC6Q16204 474 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 C6orf10Q5SRN2 563 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 SH3KBP1Q96B97 665 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 OR51B5Q9H339 312 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 BRF2Q9HAW0 419 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 SLC6A13Q9NSD5 602 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 TMEM45AQ9NWC5 275 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 PCDHA9Q9Y5H5 950 aa17.73■□□□□ 0.43
USP39-201ENST00000323701 FEZF1A0PJY2 475 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 PRAMEF26H0Y7S4 382 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 H7BY64 318 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 KCNJ13O60928 360 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 TGFB1P01137 390 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 CELA2BP08218 269 aaPredicted RBP17.72■□□□□ 0.43
USP39-201ENST00000323701 MTHFD1P11586 935 aaKnown RBP17.72■□□□□ 0.43
USP39-201ENST00000323701 ACTR1BP42025 376 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 CCR5P51681 352 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 CLDN8P56748 225 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 ACTR1AP61163 376 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 GPR153Q6NV75 609 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 RIMKLAQ8IXN7 391 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 SMPDL3AQ92484 453 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 TMEM125Q96AQ2 219 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 PRAP1Q96NZ9 151 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 DMRT3Q9NQL9 472 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 USP22Q9UPT9 525 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 SDK1Q7Z5N4 2213 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 ABCA7Q8IZY2 2146 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 AKAP10O43572 662 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 GBAP04062 536 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 PGRP06401 933 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 PKLRP30613 574 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 RAB28P51157 221 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 YPEL5P62699 121 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 SELPLGQ14242 412 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 FLOT2Q14254 428 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 ARMCX6Q7L4S7 300 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 C17orf64Q86WR6 236 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 DPP10Q8N608 796 aa17.72■□□□□ 0.43
USP39-201ENST00000323701 ANKRD53Q8N9V6 530 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms