RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CEP295NLQ96MC4 621 aa14.84□□□□□ -0.03
VARS2-201ENST00000321897 Q96MT0 163 aa14.84□□□□□ -0.03
VARS2-201ENST00000321897 YIPF4Q9BSR8 244 aa14.84□□□□□ -0.03
VARS2-201ENST00000321897 H2AFY2Q9P0M6 372 aaPredicted RBP14.84□□□□□ -0.03
VARS2-201ENST00000321897 RHCGQ9UBD6 479 aa14.84□□□□□ -0.03
VARS2-201ENST00000321897 ADH1AP07327 375 aa14.83□□□□□ -0.03
VARS2-201ENST00000321897 ALPPL2P10696 532 aa14.83□□□□□ -0.03
VARS2-201ENST00000321897 PSKH1P11801 424 aa14.83□□□□□ -0.03
VARS2-201ENST00000321897 TALDO1P37837 337 aa14.83□□□□□ -0.03
VARS2-201ENST00000321897 ADGRG5Q8IZF4 528 aa14.83□□□□□ -0.03
VARS2-201ENST00000321897 YTHDF1Q9BYJ9 559 aaKnown RBP14.83□□□□□ -0.03
VARS2-201ENST00000321897 OR51B5Q9H339 312 aa14.83□□□□□ -0.03
VARS2-201ENST00000321897 SUV39H2Q9H5I1 410 aa14.83□□□□□ -0.03
VARS2-201ENST00000321897 B4GALT6Q9UBX8 382 aa14.83□□□□□ -0.03
VARS2-201ENST00000321897 SLC1A7O00341 560 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 B4GALT3O60512 393 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 GUCY1B2O75343 617 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 RPLP0P05388 317 aaKnown RBP14.83□□□□□ -0.04
VARS2-201ENST00000321897 CCNYL3P0C7X3 344 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 CYP2A6P11509 494 aaPredicted RBP14.83□□□□□ -0.04
VARS2-201ENST00000321897 TNNI3P19429 210 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 IDUAP35475 653 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 SGSHP51688 502 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 CDC42P60953 191 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 ANGPT1Q15389 498 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 MPPE1Q53F39 396 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 HMBOX1Q6NT76 420 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 DPY19L3Q6ZPD9 716 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 FAM217AQ8IXS0 508 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 COLGALT2Q8IYK4 626 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 SPARTQ8N0X7 666 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 PIH1D2Q8WWB5 315 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 ZUFSPQ96AP4 578 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 MYRFLQ96LU7 910 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 DSN1Q9H410 356 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 COMMD3Q9UBI1 195 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 CNOT11Q9UKZ1 510 aaKnown RBP14.83□□□□□ -0.04
VARS2-201ENST00000321897 PCDHGA10Q9Y5H3 936 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 AP1G1O43747 822 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 NSG1P42857 185 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 USP39Q53GS9 565 aaKnown RBP14.83□□□□□ -0.04
VARS2-201ENST00000321897 TMEM207Q6UWW9 146 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 RFLNAQ6ZTI6 216 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 SNX20Q7Z614 316 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 BTLAQ7Z6A9 289 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 C1orf52Q8N6N3 182 aaKnown RBP14.83□□□□□ -0.04
VARS2-201ENST00000321897 KREMEN2Q8NCW0 462 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 OR5K1Q8NHB7 308 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 ZNF486Q96H40 463 aaPredicted RBP14.83□□□□□ -0.04
VARS2-201ENST00000321897 ART5Q96L15 291 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 DERL2Q9GZP9 239 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 FAM118AQ9NWS6 357 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 ING3Q9NXR8 418 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 PEX16Q9Y5Y5 336 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 SEC16AO15027 2179 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 DOCK3Q8IZD9 2030 aa14.83□□□□□ -0.04
VARS2-201ENST00000321897 HAT1O14929 419 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 C9P02748 559 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 C8BP07358 591 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 EMP3P54852 163 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 EEFSECP57772 596 aaKnown RBP14.82□□□□□ -0.04
VARS2-201ENST00000321897 LRP8Q14114 963 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 CES5AQ6NT32 575 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 EPHX4Q8IUS5 362 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 GHDCQ8N2G8 530 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 RAB42Q8N4Z0 105 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 ARRDC2Q8TBH0 407 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 PAWRQ96IZ0 340 aaKnown RBP14.82□□□□□ -0.04
VARS2-201ENST00000321897 HHLA1C9JL84 531 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 TNFRSF1BP20333 461 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 TUBA3CQ13748 450 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 ATP6AP1Q15904 470 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 OR2AP1Q8NGE2 309 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 PPCDCQ96CD2 204 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 INIPQ9NRY2 104 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 FAM47E-STBD1D6RA91 191 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 CLIC1O00299 241 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 PLK4O00444 970 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 KDELR3O43731 214 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 BUD31P41223 144 aaPredicted RBP14.82□□□□□ -0.04
VARS2-201ENST00000321897 MANFP55145 182 aaKnown RBP14.82□□□□□ -0.04
VARS2-201ENST00000321897 AP1S1P61966 158 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 TP53INP1Q96A56 240 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 EGLN2Q96KS0 407 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 ALPK1Q96QP1 1244 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 MEAF6Q9HAF1 191 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 TREX1Q9NSU2 369 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 NLE1Q9NVX2 485 aaPredicted RBP14.82□□□□□ -0.04
VARS2-201ENST00000321897 RNF6Q9Y252 685 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 DYRK3O43781 588 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 CYBAP13498 195 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 ENGP17813 658 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 MYL12AP19105 171 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 PTGS2P35354 604 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 DNAJB13P59910 316 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 SCN1BQ07699 218 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 IL18Q14116 193 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 RAB41Q5JT25 222 aa14.82□□□□□ -0.04
VARS2-201ENST00000321897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.82□□□□□ -0.04
VARS2-201ENST00000321897 TIGD4Q8IY51 512 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms