RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 TCAIMQ8N3R3 496 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 THUMPD1Q9NXG2 353 aaKnown RBP16.02■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF860A6NHJ4 632 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 ADAMDEC1O15204 470 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 CCNKO75909 580 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 PDYNP01213 254 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 IDSP22304 550 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 CD70P32970 193 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 SCARB2Q14108 478 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 TMEM236Q5W0B7 351 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 KLHL35Q6PF15 583 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 ZNF554Q86TJ5 538 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 C7orf61Q8IZ16 206 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 HDDC3Q8N4P3 179 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 TFGQ92734 400 aaPredicted RBP16.02■□□□□ 0.16
CLIP4-201ENST00000320081 CD244Q9BZW8 370 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 CORO2BQ9UQ03 480 aa16.02■□□□□ 0.16
CLIP4-201ENST00000320081 A0A0J9YVX5 310 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 ZNF99A8MXY4 864 aaPredicted RBP16.02■□□□□ 0.15
CLIP4-201ENST00000320081 LEFTY2O00292 366 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 TEX28O15482 410 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 ERI3O43414 337 aaKnown RBP16.02■□□□□ 0.15
CLIP4-201ENST00000320081 GABBR2O75899 941 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 FGF18O76093 207 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 VIPP01282 170 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 MLLT1Q03111 559 aaPredicted RBP16.02■□□□□ 0.15
CLIP4-201ENST00000320081 TIGD6Q17RP2 521 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 ZBED5Q49AG3 693 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 PKDCCQ504Y2 493 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 ERICH5Q6P6B1 374 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 FAM180AQ6UWF9 173 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 TMEM25Q86YD3 366 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 DTX3Q8N9I9 347 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 CHST14Q8NCH0 376 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 SLAIN1Q8ND83 568 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 EGLN2Q96KS0 407 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 BARD1Q99728 777 aaKnown RBP16.02■□□□□ 0.15
CLIP4-201ENST00000320081 HTATIP2Q9BUP3 242 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 C1QTNF7Q9BXJ2 289 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 KAT8Q9H7Z6 458 aaKnown RBP16.02■□□□□ 0.15
CLIP4-201ENST00000320081 SLC28A3Q9HAS3 691 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.02■□□□□ 0.15
CLIP4-201ENST00000320081 SLC27A6Q9Y2P4 619 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 SLC22A2O15244 555 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 DYRK3O43781 588 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 OR6A2O95222 327 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 PAPSS2O95340 614 aaPredicted RBP16.02■□□□□ 0.15
CLIP4-201ENST00000320081 CYP11A1P05108 521 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 TCF3P15923 654 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.02■□□□□ 0.15
CLIP4-201ENST00000320081 CEACAM20Q6UY09 585 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 GALNT13Q8IUC8 556 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 DCAF4L2Q8NA75 395 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 DRAXINQ8NBI3 349 aaPredicted RBP16.02■□□□□ 0.15
CLIP4-201ENST00000320081 DNAJC27Q9NZQ0 273 aa16.02■□□□□ 0.15
CLIP4-201ENST00000320081 TJP1Q07157 1748 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 EFCAB14O75071 495 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 CCNB2O95067 398 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 EPOP01588 193 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 LASP1Q14847 261 aaKnown RBP16.01■□□□□ 0.15
CLIP4-201ENST00000320081 TOMM20Q15388 145 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 BHLHB9Q6PI77 547 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 ZZZ3Q8IYH5 903 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 POMGNT2Q8NAT1 580 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 LINC00597Q9H2U6 94 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 GSTO2Q9H4Y5 243 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 TRBC2A0A5B9 178 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 ZNF487B1APH4 448 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 CBFA2T3O75081 653 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 DNAJB13P59910 316 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 EMX2Q04743 252 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 HEPACAMQ14CZ8 416 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 ZNF557Q8N988 423 aaPredicted RBP16.01■□□□□ 0.15
CLIP4-201ENST00000320081 FRS2Q8WU20 508 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 COX4I2Q96KJ9 171 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 Q96MT0 163 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 COQ7Q99807 217 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 CXXC1Q9P0U4 656 aaPredicted RBP16.01■□□□□ 0.15
CLIP4-201ENST00000320081 PCDHGA7Q9Y5G6 932 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 FAM240BA0A1B0GVZ2 78 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 HAT1O14929 419 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 SLC6A4P31645 630 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 RPL3P39023 403 aaKnown RBP16.01■□□□□ 0.15
CLIP4-201ENST00000320081 KCNC1P48547 511 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 C5orf22Q49AR2 442 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 CRTC2Q53ET0 693 aaPredicted RBP16.01■□□□□ 0.15
CLIP4-201ENST00000320081 CRB2Q5IJ48 1285 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 RNF130Q86XS8 419 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 FAM98AQ8NCA5 519 aaKnown RBP16.01■□□□□ 0.15
CLIP4-201ENST00000320081 OR13J1Q8NGT2 312 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 C1orf74Q96LT6 269 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 CARS2Q9HA77 564 aaKnown RBP16.01■□□□□ 0.15
CLIP4-201ENST00000320081 CREBZFQ9NS37 354 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 MKS1Q9NXB0 559 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 RIMKLBQ9ULI2 386 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 ZNF510Q9Y2H8 683 aa16.01■□□□□ 0.15
CLIP4-201ENST00000320081 MUSKO15146 869 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 GRM2Q14416 872 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 GPR68Q15743 365 aa16■□□□□ 0.15
CLIP4-201ENST00000320081 MAVSQ7Z434 540 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms