RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 H7BY64 318 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 SH3BP5O60239 455 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 CBFA2T3O75081 653 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 CRCPO75575 148 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 C9P02748 559 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 GP1BAP07359 652 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 CAPN1P07384 714 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 ALOX15P16050 662 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-201ENST00000320054 CD22P20273 847 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 HMOX2P30519 316 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 GRIA3P42263 894 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 LIMK1P53667 647 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 FOXA1P55317 472 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 YBX1P67809 324 aaKnown RBP13.08□□□□□ -0.32
PRPF18-201ENST00000320054 CSNK1G2P78368 415 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 REEP5Q00765 189 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 ZNF33BQ06732 778 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 HIST2H2ACQ16777 129 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-201ENST00000320054 UGT3A2Q3SY77 523 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 C10orf62Q5T681 223 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-201ENST00000320054 KIAA1614Q5VZ46 1190 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 HIST2H2AA3Q6FI13 130 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 PAQR7Q86WK9 346 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 PLXDC1Q8IUK5 500 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 WDR75Q8IWA0 830 aaKnown RBP13.08□□□□□ -0.32
PRPF18-201ENST00000320054 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 CDYL2Q8N8U2 506 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 DCBLD1Q8N8Z6 715 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 Q8N9G6 341 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-201ENST00000320054 METTL6Q8TCB7 284 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 NCSTNQ92542 709 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 UBE2E3Q969T4 207 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 REPS1Q96D71 796 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 ZDHHC12Q96GR4 267 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 PRAP1Q96NZ9 151 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 CDC6Q99741 560 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 AIF1LQ9BQI0 150 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 CCDC3Q9BQI4 270 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 SIKE1Q9BRV8 207 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 SARGQ9BW04 601 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 TRIM55Q9BYV6 548 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 SEMA6CQ9H3T2 930 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 C1GALT1Q9NS00 363 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 PSD3Q9NYI0 1048 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 SNX6Q9UNH7 406 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 PCDHGA11Q9Y5H2 935 aa13.08□□□□□ -0.32
PRPF18-201ENST00000320054 RIF1Q5UIP0 2472 aaKnown RBP13.08□□□□□ -0.32
PRPF18-201ENST00000320054 TRBC2A0A5B9 178 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 SERTM1A2A2V5 107 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 OR2A25A4D2G3 310 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 TLCD2A6NGC4 264 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 TMEM233B4DJY2 109 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 HDAC3O15379 428 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 CAPN5O15484 640 aaPredicted RBP13.07□□□□□ -0.32
PRPF18-201ENST00000320054 CHEK2O96017 543 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 KRT6AP02538 564 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 KRT6BP04259 564 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 TROVE2P10155 538 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRPF18-201ENST00000320054 VARSP26640 1264 aaKnown RBP13.07□□□□□ -0.32
PRPF18-201ENST00000320054 KRT6CP48668 564 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 PPP1CAP62136 330 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 SLBPQ14493 270 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRPF18-201ENST00000320054 ZRSR2Q15696 482 aaKnown RBP13.07□□□□□ -0.32
PRPF18-201ENST00000320054 CPSF6Q16630 551 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRPF18-201ENST00000320054 STPG1Q5TH74 334 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 NKAIN2Q5VXU1 208 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 CLEC6AQ6EIG7 209 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 CGB2Q6NT52 195 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 IRGCQ6NXR0 463 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 MED27Q6P2C8 311 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 FIGLAQ6QHK4 219 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 ASCL5Q7RTU5 278 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 CPLX4Q7Z7G2 160 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 PIP4P1Q86T03 277 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 TRIM73Q86UV7 250 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
PRPF18-201ENST00000320054 LAS2Q8IYD9 372 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 AGR3Q8TD06 166 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 STON2Q8WXE9 905 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 USP7Q93009 1102 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 KCNA7Q96RP8 456 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 CCT7Q99832 543 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 PLCD4Q9BRC7 762 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 CHRNA10Q9GZZ6 450 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 LRRN3Q9H3W5 708 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 SEMA5BQ9P283 1151 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 ZNF490Q9ULM2 529 aaPredicted RBP13.07□□□□□ -0.32
PRPF18-201ENST00000320054 DNAJC15Q9Y5T4 150 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 USH1CQ9Y6N9 552 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 DNAH14Q0VDD8 3507 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 FAM186AA6NE01 2351 aa13.07□□□□□ -0.32
PRPF18-201ENST00000320054 TRPC5OSA6NMA1 111 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 MANBAO00462 879 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 ZNF195O14628 629 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 CPNE6O95741 557 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 FAM107AO95990 144 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 RPLP0P05388 317 aaKnown RBP13.06□□□□□ -0.32
PRPF18-201ENST00000320054 KITP10721 976 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 MAGP20916 626 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms