RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 HDAC8Q9BY41 377 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 GORASP2Q9H8Y8 452 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SLC28A3Q9HAS3 691 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TM7SF3Q9NS93 570 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 DZANK1Q9NVP4 752 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SH2B3Q9UQQ2 575 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 RUVBL1Q9Y265 456 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 STON1Q9Y6Q2 735 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TCF20Q9UGU0 1960 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 A0A096LPI6 279 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 A0A1B0GTW7 788 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 GNG14A0A1W2PPG7 69 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 MGAT4DA6NG13 374 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CLOCKO15516 846 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 MYO1DO94832 1006 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 C1QCP02747 245 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 GNAO1P09471 354 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ANXA4P09525 319 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 SMIM18P0DKX4 95 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 RAP2AP10114 183 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 PTPN6P29350 595 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SOX9P48436 509 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 RPS13P62277 151 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 MEF2AQ02078 507 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 ZNF33BQ06732 778 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 MED27Q6P2C8 311 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 PNCKQ6P2M8 343 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ZNF621Q6ZSS3 439 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SATL1Q86VE3 508 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 AMZ2Q86W34 360 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CARM1Q86X55 608 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 PACRGLQ8N7B6 248 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 FAM47BQ8NA70 645 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 RAB7BQ96AH8 199 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 LINC00615Q96LM1 132 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 CCDC115Q96NT0 180 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 MYADMQ96S97 322 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ACAT2Q9BWD1 397 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 FAM192AQ9GZU8 254 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 DPEP2Q9H4A9 486 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SLC23A2Q9UGH3 650 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SERGEFQ9UGK8 458 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 PLAGL1Q9UM63 463 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 MAN2B2Q9Y2E5 1009 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 BTBD3Q9Y2F9 522 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CFAP20Q9Y6A4 193 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 SPTBN5Q9NRC6 3674 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 PRR23AA6NEV1 266 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SAP18O00422 153 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 PRKD3O94806 890 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 RASAL1O95294 804 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CLIC3O95833 236 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 PAK4O96013 591 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 TGFB1P01137 390 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 GBAP04062 536 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TFAP2AP05549 437 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 LAMP1P11279 417 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ACPPP15309 386 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ACADLP28330 430 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TAS2R38P59533 333 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SRSF11Q05519 484 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 VAC14Q08AM6 782 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 MERTKQ12866 999 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SLC14A1Q13336 389 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 SLBPQ14493 270 aaKnown RBP eCLIP7.31□□□□□ -1.24
IFT88-201ENST00000319980 CST6Q15828 149 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 HKDC1Q2TB90 917 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 WSCD2Q2TBF2 565 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ATG9BQ674R7 924 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 NUDT18Q6ZVK8 323 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 MICU2Q8IYU8 434 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CLECL1Q8IZS7 167 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ZNF513Q8N8E2 541 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 MFSD2AQ8NA29 543 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 FBXO15Q8NCQ5 510 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 OR5AR1Q8NGP9 310 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 OR10Q1Q8NGQ4 319 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 HM13Q8TCT9 377 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 NETO1Q8TDF5 533 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 C11orf24Q96F05 449 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 CPPED1Q9BRF8 314 aaPredicted RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 ADI1Q9BV57 179 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 UGT2B28Q9BY64 529 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ANKRD60Q9BZ19 345 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ZDHHC5Q9C0B5 715 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CAAP1Q9H8G2 361 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 CARS2Q9HA77 564 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 BRF2Q9HAW0 419 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ITM2CQ9NQX7 267 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 UTS2RQ9UKP6 389 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 ERVK-11Q9UQG0 969 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 TDRKHQ9Y2W6 561 aaKnown RBP7.31□□□□□ -1.24
IFT88-201ENST00000319980 DYRK1BQ9Y463 629 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 OR1A2Q9Y585 309 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 PLXNA2O75051 1894 aa7.31□□□□□ -1.24
IFT88-201ENST00000319980 A0A1W2PP55 124 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 EVPLLA8MZ36 301 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 FPGTO14772 594 aa7.3□□□□□ -1.24
IFT88-201ENST00000319980 DEAF1O75398 565 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms