RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 TMEM209Q96SK2 561 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 MGME1Q9BQP7 344 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 TVP23BQ9NYZ1 205 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 DAPL1A0PJW8 107 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 ZNF879B4DU55 563 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 HSD11B1P28845 292 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 HOXD13P35453 343 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 PAFAH1B3Q15102 231 aaKnown RBP13.93□□□□□ -0.18
TRIM25-201ENST00000316881 OLFML1Q6UWY5 402 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 C7orf57Q8NEG2 295 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 DHRS1Q96LJ7 313 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 LGR4Q9BXB1 951 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 ASPNQ9BXN1 380 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 NKX2-4Q9H2Z4 354 aa13.93□□□□□ -0.18
TRIM25-201ENST00000316881 WDR6Q9NNW5 1121 aaKnown RBP13.93□□□□□ -0.18
TRIM25-201ENST00000316881 HEPACAM2A8MVW5 462 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 COCHO43405 550 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 ANXA8P13928 327 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 SCRN3Q0VDG4 424 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 EIF4HQ15056 248 aaKnown RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 AGTRAPQ6RW13 159 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 GPALPP1Q8IXQ4 340 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 NRXN3Q9Y4C0 1643 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 SEMA3DO95025 777 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 ZNF3P17036 446 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 INCA1Q0VD86 236 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 AKIRIN2Q53H80 203 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 ZNF852Q6ZMS4 543 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 AHSA2Q719I0 299 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 CHERPQ8IWX8 916 aaKnown RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 SLC35B2Q8TB61 432 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 ZNF317Q96PQ6 595 aaPredicted RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 LYARQ9NX58 379 aaKnown RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 WASF2Q9Y6W5 498 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 ROBO1Q9Y6N7 1651 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 ARFGEF2Q9Y6D5 1785 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 A0A075B6Q4 140 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 TCRBV7S3A2A0A539 114 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 PIRO00625 290 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 TP53I11O14683 189 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 RBMS1P29558 406 aaKnown RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 CD47Q08722 323 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 GALNT2Q10471 571 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 PERM1Q5SV97 790 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 ADNP2Q6IQ32 1131 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 USP30Q70CQ3 517 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 ZNF280BQ86YH2 543 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 ZSCAN4Q8NAM6 433 aaPredicted RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 FOXJ1Q92949 421 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 TRPV5Q9NQA5 729 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 DNAJB4Q9UDY4 337 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 RAB26Q9ULW5 256 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 POLR2CP19387 275 aaPredicted RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 NRLP54845 237 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 RAB8AP61006 207 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 UPP1Q16831 310 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 FIP1L1Q6UN15 594 aaKnown RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 C12orf76Q8N812 135 aaPredicted RBP13.92□□□□□ -0.18
TRIM25-201ENST00000316881 OR6N1Q8NGY5 312 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 CDK15Q96Q40 435 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 GPR174Q9BXC1 333 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 CTPS2Q9NRF8 586 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 CENPMQ9NSP4 180 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 GPR34Q9UPC5 381 aa13.92□□□□□ -0.18
TRIM25-201ENST00000316881 DUX1O43812 170 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 AHSA1O95433 338 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 ITGA3P26006 1051 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 IL1R2P27930 398 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 KCNC3Q14003 757 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 ARSJQ5FYB0 599 aaPredicted RBP13.91□□□□□ -0.18
TRIM25-201ENST00000316881 SATL1Q86VE3 508 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 PROKR2Q8NFJ6 384 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 C1orf216Q8TAB5 229 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 C1orf74Q96LT6 269 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 CEP295NLQ96MC4 621 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 WDR12Q9GZL7 423 aaKnown RBP13.91□□□□□ -0.18
TRIM25-201ENST00000316881 PADI2Q9Y2J8 665 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 NPC1O15118 1278 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 HMGCS1Q01581 520 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 TMEM115Q12893 351 aaPredicted RBP13.91□□□□□ -0.18
TRIM25-201ENST00000316881 UPB1Q9UBR1 384 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 MYCLP1P12525 358 aaPredicted RBP13.91□□□□□ -0.18
TRIM25-201ENST00000316881 GSTM3P21266 225 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 PEX2P28328 305 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 BMPR1AP36894 532 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 ARCN1P48444 511 aaKnown RBP13.91□□□□□ -0.18
TRIM25-201ENST00000316881 GBX2P52951 348 aaPredicted RBP13.91□□□□□ -0.18
TRIM25-201ENST00000316881 HSF2Q03933 536 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 C5orf22Q49AR2 442 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 RNASE12Q5GAN4 147 aaKnown RBP13.91□□□□□ -0.18
TRIM25-201ENST00000316881 CRB2Q5IJ48 1285 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 NPY6RQ99463 290 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 CHCHD6Q9BRQ6 235 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 SLC2A11Q9BYW1 496 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 SEC61A2Q9H9S3 476 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 TAS2R1Q9NYW7 299 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 CA14Q9ULX7 337 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 MGAT4AQ9UM21 535 aa13.91□□□□□ -0.18
TRIM25-201ENST00000316881 PSMD9O00233 223 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms