RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 CAPNS1P04632 268 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 EIF2S1P05198 315 aaKnown RBP7.54□□□□□ -1.2
CDC42-201ENST00000315554 NUDT17P0C025 328 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 GFAPP14136 432 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 NPPBP16860 134 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 SLC26A3P40879 764 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 GABRA4P48169 554 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 VSX2P58304 361 aaPredicted RBP7.54□□□□□ -1.2
CDC42-201ENST00000315554 CDKL1Q00532 357 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 ACY1Q03154 408 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 PRDX1Q06830 199 aaKnown RBP7.54□□□□□ -1.2
CDC42-201ENST00000315554 SRSF6Q13247 344 aaKnown RBP7.54□□□□□ -1.2
CDC42-201ENST00000315554 ACAP2Q15057 778 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 PFKFB4Q16877 469 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 TECRLQ5HYJ1 363 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 CATSPEREQ5SY80 951 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 TMEM164Q5U3C3 297 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 FRMPD2BQ6IN97 320 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 KLC3Q6P597 504 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 LCTLQ6UWM7 567 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 CEACAM20Q6UY09 585 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 TIFABQ6ZNK6 161 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 PAQR7Q86WK9 346 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 C17orf64Q86WR6 236 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 PPP1R3BQ86XI6 285 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 TDRPQ86YL5 185 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 TMEM126BQ8IUX1 230 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 MCATQ8IVS2 390 aaKnown RBP7.54□□□□□ -1.2
CDC42-201ENST00000315554 OR4N4Q8N0Y3 316 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 LSMEM2Q8N112 164 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 CARFQ8N187 725 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 TMEM151AQ8N4L1 468 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 SNX31Q8N9S9 440 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 NEIL2Q969S2 332 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 MTBPQ96DY7 904 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 ZNF578Q96N58 590 aaPredicted RBP7.54□□□□□ -1.2
CDC42-201ENST00000315554 MACROD1Q9BQ69 325 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 DDA1Q9BW61 102 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 SGPP1Q9BX95 441 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 ULBP3Q9BZM4 244 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 SPNS1Q9H2V7 528 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 FANCEQ9HB96 536 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 EURLQ9NYK6 297 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 NUDT4Q9NZJ9 180 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 TMEM216Q9P0N5 145 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 DYRK1BQ9Y463 629 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 ANKRD12Q6UB98 2062 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 SNRNP200O75643 2136 aaKnown RBP7.54□□□□□ -1.2
CDC42-201ENST00000315554 FRYQ5TBA9 3013 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 OR2A25A4D2G3 310 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 E7EQ34 232 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 NVLO15381 856 aaKnown RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 CDH16O75309 829 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 ERLIN1O75477 346 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 SCRG1O75711 98 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 OR2B3O76000 313 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 STK17BO94768 372 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 SIX3O95343 332 aaPredicted RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 SBK3P0C264 359 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 VSIG8P0DPA2 414 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 FGF5P12034 268 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 MTHFD2P13995 350 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 CD53P19397 219 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 VARSP26640 1264 aaKnown RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 SLC6A12P48065 614 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 ITGA1P56199 1179 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 RAB15P59190 212 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 CSNK1G2P78368 415 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 ABATP80404 500 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 ZNF844Q08AG5 666 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 KRT71Q3SY84 523 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 C1orf189Q5VU69 101 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 FAM219BQ5XKK7 198 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 SULT1C3Q6IMI6 304 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 ZNF425Q6IV72 752 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 FBXO42Q6P3S6 717 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 RPS27LQ71UM5 84 aaKnown RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 TIPARPQ7Z3E1 657 aaKnown RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 TMPRSS11BQ86T26 416 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 VASH2Q86V25 355 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 JAZF1Q86VZ6 243 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 DTWD1Q8N5C7 304 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 METTL27Q8N6F8 245 aaPredicted RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 ZNF655Q8N720 491 aaPredicted RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 PTGR2Q8N8N7 351 aaPredicted RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 GALNT6Q8NCL4 622 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 PDPRQ8NCN5 879 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 ZNF740Q8NDX6 193 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 SLC5A11Q8WWX8 675 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 FGF11Q92914 225 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 ZUFSPQ96AP4 578 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 PHF21BQ96EK2 531 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 ZIM3Q96PE6 472 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 SELENOSQ9BQE4 189 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 ASPSCR1Q9BZE9 553 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 CENPHQ9H3R5 247 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 AKIRIN1Q9H9L7 192 aaPredicted RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 PTBP2Q9UKA9 531 aaKnown RBP7.53□□□□□ -1.2
CDC42-201ENST00000315554 SNX7Q9UNH6 387 aa7.53□□□□□ -1.2
CDC42-201ENST00000315554 PLCL2Q9UPR0 1127 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms