RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SOBPA7XYQ1 873 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 EIF3FO00303 357 aaPredicted RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 ARNTLO00327 626 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 JUPP14923 745 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 AMD1P17707 334 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 GDI1P31150 447 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 IST1P53990 364 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 CASP9P55211 416 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 NUP107P57740 925 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 TBPL1P62380 186 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 CTBSQ01459 385 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 CYP4F3Q08477 520 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 SFSWAPQ12872 951 aaKnown RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 LAPTM5Q13571 262 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 TMEM214Q6NUQ4 689 aaKnown RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 FOPNLQ96NB1 174 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 MYADMQ96S97 322 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 CHID1Q9BWS9 393 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 AGPAT4Q9NRZ5 378 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 THG1LQ9NWX6 298 aaKnown RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 SLC23A2Q9UGH3 650 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 GSTA4O15217 222 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 C1orf105O95561 183 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 FUT4P22083 530 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 PDGFRLQ15198 375 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 SYT12Q8IV01 421 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 YAF2Q8IY57 180 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 ZNF740Q8NDX6 193 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 TRPV3Q8NET8 790 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 CXorf40AQ8TE69 158 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 GLMNQ92990 594 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 NCLNQ969V3 563 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 THAP11Q96EK4 314 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 BTBD3Q9Y2F9 522 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 NUP210Q8TEM1 1887 aaPredicted RBP12.01□□□□□ -0.49
RNF4-201ENST00000314289 PCM1Q15154 2024 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 EI24O14681 340 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 SLC16A5O15375 505 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 LILRB5O75023 590 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 CAPNS1P04632 268 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 IL6P05231 212 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 TIE1P35590 1138 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 CLCN2P51788 898 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 ELP6Q0PNE2 266 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 C2orf27AQ580R0 203 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 FAM180BQ6P0A1 224 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 SYCE2Q6PIF2 218 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 HEATR4Q86WZ0 1026 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 PTRH1Q86Y79 214 aaKnown RBP12.01□□□□□ -0.49
RNF4-201ENST00000314289 CLECL1Q8IZS7 167 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 TMIEQ8NEW7 156 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 CCDC138Q96M89 665 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 SPNS1Q9H2V7 528 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 SERHLQ9NQF3 203 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 LIMD1Q9UGP4 676 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 ERVK-11Q9UQG0 969 aa12.01□□□□□ -0.49
RNF4-201ENST00000314289 A0A1W2PP55 124 aa12□□□□□ -0.49
RNF4-201ENST00000314289 CPSF4O95639 269 aaKnown RBP12□□□□□ -0.49
RNF4-201ENST00000314289 PAK4O96013 591 aaPredicted RBP12□□□□□ -0.49
RNF4-201ENST00000314289 HTR1EP28566 365 aa12□□□□□ -0.49
RNF4-201ENST00000314289 GPR107Q5VW38 600 aa12□□□□□ -0.49
RNF4-201ENST00000314289 TBPL2Q6SJ96 375 aa12□□□□□ -0.49
RNF4-201ENST00000314289 XKR5Q6UX68 686 aa12□□□□□ -0.49
RNF4-201ENST00000314289 CROCCP3Q8IVE0 287 aa12□□□□□ -0.49
RNF4-201ENST00000314289 AADATQ8N5Z0 425 aa12□□□□□ -0.49
RNF4-201ENST00000314289 C1orf52Q8N6N3 182 aaKnown RBP12□□□□□ -0.49
RNF4-201ENST00000314289 ZBTB8BQ8NAP8 495 aaPredicted RBP12□□□□□ -0.49
RNF4-201ENST00000314289 OR5AR1Q8NGP9 310 aa12□□□□□ -0.49
RNF4-201ENST00000314289 HUS1BQ8NHY5 278 aa12□□□□□ -0.49
RNF4-201ENST00000314289 MAGEE2Q8TD90 523 aaPredicted RBP12□□□□□ -0.49
RNF4-201ENST00000314289 CYGBQ8WWM9 190 aa12□□□□□ -0.49
RNF4-201ENST00000314289 DUS3LQ96G46 650 aaKnown RBP12□□□□□ -0.49
RNF4-201ENST00000314289 UHRF1Q96T88 793 aaPredicted RBP12□□□□□ -0.49
RNF4-201ENST00000314289 REXO4Q9GZR2 422 aaKnown RBP12□□□□□ -0.49
RNF4-201ENST00000314289 VPS29Q9UBQ0 182 aa12□□□□□ -0.49
RNF4-201ENST00000314289 ASF1AQ9Y294 204 aa12□□□□□ -0.49
RNF4-201ENST00000314289 YY2O15391 372 aa12□□□□□ -0.49
RNF4-201ENST00000314289 ATE1O95260 518 aa12□□□□□ -0.49
RNF4-201ENST00000314289 CLDN8P56748 225 aa12□□□□□ -0.49
RNF4-201ENST00000314289 DLX2Q07687 328 aaPredicted RBP12□□□□□ -0.49
RNF4-201ENST00000314289 KCNC3Q14003 757 aa12□□□□□ -0.49
RNF4-201ENST00000314289 NKG7Q16617 165 aa12□□□□□ -0.49
RNF4-201ENST00000314289 HKDC1Q2TB90 917 aa12□□□□□ -0.49
RNF4-201ENST00000314289 CDKL4Q5MAI5 379 aa12□□□□□ -0.49
RNF4-201ENST00000314289 Q6ZNX1 250 aa12□□□□□ -0.49
RNF4-201ENST00000314289 GPR180Q86V85 440 aa12□□□□□ -0.49
RNF4-201ENST00000314289 NLRP8Q86W28 1048 aa12□□□□□ -0.49
RNF4-201ENST00000314289 OR7G3Q8NG95 312 aa12□□□□□ -0.49
RNF4-201ENST00000314289 WDR20Q8TBZ3 569 aa12□□□□□ -0.49
RNF4-201ENST00000314289 PPP1R16AQ96I34 528 aa12□□□□□ -0.49
RNF4-201ENST00000314289 MBNL1Q9NR56 388 aaKnown RBP12□□□□□ -0.49
RNF4-201ENST00000314289 RAD18Q9NS91 495 aa12□□□□□ -0.49
RNF4-201ENST00000314289 ADGRE2Q9UHX3 823 aa12□□□□□ -0.49
RNF4-201ENST00000314289 PAIP2BQ9ULR5 123 aaKnown RBP12□□□□□ -0.49
RNF4-201ENST00000314289 LAMA1P25391 3075 aa12□□□□□ -0.49
RNF4-201ENST00000314289 A0A1W2PPW3 197 aa12□□□□□ -0.49
RNF4-201ENST00000314289 TGFB1P01137 390 aa12□□□□□ -0.49
RNF4-201ENST00000314289 BMP2P12643 396 aa12□□□□□ -0.49
RNF4-201ENST00000314289 DRD3P35462 400 aa12□□□□□ -0.49
RNF4-201ENST00000314289 CCT8P50990 548 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms