RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CDH11P55287 796 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 GPX6P59796 221 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 CDK6Q00534 326 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 KCNJ11Q14654 390 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 SPIN4Q56A73 249 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 FRG2Q64ET8 278 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 PSRC1Q6PGN9 363 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-201ENST00000312413 NTAN1Q96AB6 310 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 FRG2BQ96QU4 278 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 TMEM59LQ9UK28 342 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 LOC100509620A0A075B734 347 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 C2orf92A0A1B0GVN3 265 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 TLX2O43763 284 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-201ENST00000312413 NUAK1O60285 661 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 SPATA31D3P0C874 917 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 GADD45AP24522 165 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 CLCNKBP51801 687 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 PDX1P52945 283 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 ILF3Q12906 894 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLCN6-201ENST00000312413 SPATA31D4Q6ZUB0 917 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 PROKR2Q8NFJ6 384 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 OR9I1Q8NGQ6 314 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 ZNF285Q96NJ3 590 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 RDH12Q96NR8 316 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 TM9SF3Q9HD45 589 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 GALPQ9UBC7 116 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 ERVW-1Q9UQF0 538 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 A0A1B0GVC2 190 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 ZNF878C9JN71 531 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 HAS3O00219 553 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 PMM2O15305 246 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 EPHX1P07099 455 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 UFM1P61960 85 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 RFTN1Q14699 578 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-201ENST00000312413 UGT8Q16880 541 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 ALG1LQ6GMV1 187 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 ZC3HC1Q86WB0 502 aaKnown RBP13.34□□□□□ -0.27
CLCN6-201ENST00000312413 HDAC2Q92769 488 aaKnown RBP13.34□□□□□ -0.27
CLCN6-201ENST00000312413 ZUFSPQ96AP4 578 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 HSH2DQ96JZ2 352 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 DHRS1Q96LJ7 313 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 SLC32A1Q9H598 525 aa13.34□□□□□ -0.27
CLCN6-201ENST00000312413 SCGB1D2O95969 90 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 ARSFP54793 590 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 SLC13A2Q13183 592 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 OR5AK3PQ8NH89 298 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 PMEPA1Q969W9 287 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 S100PBPQ96BU1 408 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 PYCR2Q96C36 320 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 SLC7A6OSQ96CW6 309 aaPredicted RBP13.33□□□□□ -0.27
CLCN6-201ENST00000312413 SNX27Q96L92 541 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 ADAD1Q96M93 576 aaKnown RBP13.33□□□□□ -0.27
CLCN6-201ENST00000312413 SLC29A3Q9BZD2 475 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 BTBD1Q9H0C5 482 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 NR2E3Q9Y5X4 410 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 BCL9O00512 1426 aa13.33□□□□□ -0.27
CLCN6-201ENST00000312413 C13orf42A0A1B0GVH6 325 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 MYBPHLA2RUH7 354 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 J3QLW9 94 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 AGR2O95994 175 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 APODP05090 189 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 ZNF19P17023 458 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 PRKACGP22612 351 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 ASPAP45381 313 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 TTLQ8NG68 377 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 PRICKLE1Q96MT3 831 aaPredicted RBP13.33□□□□□ -0.28
CLCN6-201ENST00000312413 TMEM74Q96NL1 305 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 HAPLN3Q96S86 360 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 MTFR1LQ9H019 292 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 COPS7AQ9UBW8 275 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 KLRG2A4D1S0 409 aaPredicted RBP13.33□□□□□ -0.28
CLCN6-201ENST00000312413 FAM170BA6NMN3 283 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 A8MV72 311 aaPredicted RBP13.33□□□□□ -0.28
CLCN6-201ENST00000312413 FAM189A1O60320 539 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 NPPAP01160 153 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 MMP3P08254 477 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 SLBPQ14493 270 aaKnown RBP eCLIP13.33□□□□□ -0.28
CLCN6-201ENST00000312413 SEC23BQ15437 767 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 RABL3Q5HYI8 236 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 LRRC70Q7Z2Q7 622 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 ZNF101Q8IZC7 436 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
CLCN6-201ENST00000312413 SGCDQ92629 289 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 PLD4Q96BZ4 506 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 S100A16Q96FQ6 103 aaKnown RBP13.33□□□□□ -0.28
CLCN6-201ENST00000312413 ABCD2Q9UBJ2 740 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 MAFBQ9Y5Q3 323 aaPredicted RBP13.33□□□□□ -0.28
CLCN6-201ENST00000312413 RP2O75695 350 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 RPP14O95059 124 aaKnown RBP13.33□□□□□ -0.28
CLCN6-201ENST00000312413 BCHEP06276 602 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 IL1R2P27930 398 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 CDKL4Q5MAI5 379 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 AMIGO1Q86WK6 493 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 CEP97Q8IW35 865 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 HDDC3Q8N4P3 179 aa13.33□□□□□ -0.28
CLCN6-201ENST00000312413 TM9SF2Q99805 663 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms