RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 HEPACAM2A8MVW5 462 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 MAGEB17A8MXT2 336 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ITM2AO43736 263 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 PRMT3O60678 531 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ERN1O75460 977 aaKnown RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 TACR2P21452 398 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 PSMA6P60900 246 aaKnown RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 GRM2Q14416 872 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 PLA2G4EQ3MJ16 856 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ANKDD1AQ495B1 522 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 XKRXQ6PP77 449 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 VITQ6UXI7 678 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 CHSY3Q70JA7 882 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 KBTBD6Q86V97 674 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 MARCH9Q86YJ5 346 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 CD300LFQ8TDQ1 290 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 SETD7Q8WTS6 366 aaKnown RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 TMBIM1Q969X1 311 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 CCDC120Q96HB5 630 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ZNF347Q96SE7 839 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 TMEM246Q9BRR3 403 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 EBPLQ9BY08 206 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 RNF39Q9H2S5 420 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 METTL8Q9H825 291 aaKnown RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 GLOD4Q9HC38 313 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 BRD7Q9NPI1 651 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 URADA6NGE7 173 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ISM1B1AKI9 464 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ATXN1P54253 815 aaKnown RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 WDR4P57081 412 aaKnown RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 RGS8P57771 180 aaPredicted RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 TARDBPQ13148 414 aaKnown RBP eCLIP7.98□□□□□ -1.13
VPS41-202ENST00000310301 ZNF460Q14592 562 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 LARS2Q15031 903 aaKnown RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 POM121L1PQ3SYA9 428 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 CDKL4Q5MAI5 379 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ANKRD54Q6NXT1 300 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 RHBDF2Q6PJF5 856 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 LDB1Q86U70 411 aaPredicted RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 KLHL36Q8N4N3 616 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 C7orf57Q8NEG2 295 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 OR2L2Q8NH16 312 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 SETD6Q8TBK2 473 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 RERGQ96A58 199 aaPredicted RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 LGR4Q9BXB1 951 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 LOC100130705A0A1B0GUX0 176 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 OR4F21O95013 312 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 INMTO95050 263 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 CDRT1O95170 752 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 C1RP00736 705 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 CSF2P04141 144 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ANXA4P09525 319 aaPredicted RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 ZNF182P17025 639 aaPredicted RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 ITPKBP27987 946 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 CDKN2BP42772 138 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 RGS19P49795 217 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 RHDQ02161 417 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 TMEM31Q5JXX7 168 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 POMZP3Q6PJE2 187 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 SNX20Q7Z614 316 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 TMPRSS11BQ86T26 416 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 IRF2BP1Q8IU81 584 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 C12orf29Q8N999 325 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 PCDH19Q8TAB3 1148 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 AZIN2Q96A70 460 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 FERD3LQ96RJ6 166 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 HBEGFQ99075 208 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ANKHQ9HCJ1 492 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ITM2CQ9NQX7 267 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 SCAMP3O14828 347 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 ARPC2O15144 300 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 LILRB3O75022 631 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 RP2O75695 350 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SLC25A14O95258 325 aaPredicted RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 POP4O95707 220 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 PLATP00750 562 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ERP29P30040 261 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 GRIA2P42262 883 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 MARSP56192 900 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 MVKQ03426 396 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 GANABQ14697 944 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 PARP15Q460N3 678 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SMYD5Q6GMV2 418 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 EIF5AL1Q6IS14 154 aaKnown RBP7.97□□□□□ -1.13
VPS41-202ENST00000310301 PAQR7Q86WK9 346 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ZNF280BQ86YH2 543 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 FOXRED2Q8IWF2 684 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TCEAL8Q8IYN2 117 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 PM20D2Q8IYS1 436 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 C1orf216Q8TAB5 229 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 DNASE1L2Q92874 299 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 GPR21Q99679 349 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ELOVL2Q9NXB9 296 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TAS2R3Q9NYW6 316 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 NUDT4Q9NZJ9 180 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 TMEM9Q9P0T7 183 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 ERVK-11Q9UQG0 969 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 SLC27A6Q9Y2P4 619 aa7.97□□□□□ -1.13
VPS41-202ENST00000310301 GMFGO60234 142 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms