RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 GPRC5BQ9NZH0 403 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 ANKMY1Q9P2S6 941 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 PCTPQ9UKL6 214 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 PCM1Q15154 2024 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 A0A0J9YVX5 310 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 MED19A0JLT2 244 aaPredicted RBP12.36□□□□□ -0.43
APTX-201ENST00000309615 FEZF1A0PJY2 475 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 B4E171 279 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 PRPF4O43172 522 aaKnown RBP eCLIP12.36□□□□□ -0.43
APTX-201ENST00000309615 CTSBP07858 339 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 RPS17P08708 135 aaKnown RBP12.36□□□□□ -0.43
APTX-201ENST00000309615 EPB42P16452 691 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 IMPDH1P20839 514 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 HRH2P25021 359 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 VARSP26640 1264 aaKnown RBP12.36□□□□□ -0.43
APTX-201ENST00000309615 TSPAN7P41732 249 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 MC2RQ01718 297 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 GTF2H2Q13888 395 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 ZNF678Q5SXM1 525 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 FRMPD2BQ6IN97 320 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 GTF2H2CQ6P1K8 395 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 METTL2BQ6P1Q9 378 aaKnown RBP12.36□□□□□ -0.43
APTX-201ENST00000309615 MCATQ8IVS2 390 aaKnown RBP12.36□□□□□ -0.43
APTX-201ENST00000309615 C10orf107Q8IVU9 208 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 GOLGA6L1Q8N7Z2 621 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 ZNF740Q8NDX6 193 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 OR4K1Q8NGD4 311 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 ZNF501Q96CX3 271 aaPredicted RBP12.36□□□□□ -0.43
APTX-201ENST00000309615 ATP6V1G3Q96LB4 118 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 MECRQ9BV79 373 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 CAPS2Q9BXY5 557 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 SPNS1Q9H2V7 528 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 ZBTB26Q9HCK0 441 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 OXSMQ9NWU1 459 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 SLC39A1Q9NY26 324 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 ANGPTL3Q9Y5C1 460 aa12.36□□□□□ -0.43
APTX-201ENST00000309615 LOC105369274A0A096LPK9 316 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 LOC102723532A0A0G2JNH3 316 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 TRABD2BA6NFA1 517 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 TMEM150CB9EJG8 249 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 POLR1CO15160 346 aaPredicted RBP12.35□□□□□ -0.43
APTX-201ENST00000309615 TNFSF15O95150 251 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 MSL3P1P0C860 447 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 EZRP15311 586 aaKnown RBP12.35□□□□□ -0.43
APTX-201ENST00000309615 ETV4P43268 484 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 CDH13P55290 713 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 ACY1Q03154 408 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 CYP4F3Q08477 520 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 UNC50Q53HI1 259 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 XKR6Q5GH73 641 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 ATG9BQ674R7 924 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 RNF44Q7L0R7 432 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 OR4N4Q8N0Y3 316 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 CCDC126Q96EE4 140 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 L3HYPDHQ96EM0 354 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 RNF31Q96EP0 1072 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 ZFYVE21Q9BQ24 234 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 C1QTNF3Q9BXJ4 246 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 NRSN2Q9GZP1 204 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 IPPKQ9H8X2 491 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 SEMA4BQ9NPR2 832 aaPredicted RBP12.35□□□□□ -0.43
APTX-201ENST00000309615 FBXO8Q9NRD0 319 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 MSRB2Q9Y3D2 182 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 PCDHGA8Q9Y5G5 932 aa12.35□□□□□ -0.43
APTX-201ENST00000309615 TMEM120BA0PK00 339 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 PPP6CO00743 305 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 OR7A17O14581 309 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 CLGNO14967 610 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 TM9SF1O15321 606 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 LCMT2O60294 686 aaKnown RBP12.34□□□□□ -0.43
APTX-201ENST00000309615 SUPT7LO94864 414 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 ZWINTO95229 277 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 C1GALT1C1LP0DN25 315 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 TSPAN8P19075 237 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 CD22P20273 847 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 ALDH3A1P30838 453 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 RELAQ04206 551 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 CHIT1Q13231 466 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 COL9A2Q14055 689 aaPredicted RBP12.34□□□□□ -0.43
APTX-201ENST00000309615 ZC3H12BQ5HYM0 836 aaKnown RBP12.34□□□□□ -0.43
APTX-201ENST00000309615 ERMP1Q7Z2K6 904 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 OR52B6Q8NGF0 335 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 OR1L3Q8NH93 324 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 ZNF483Q8TF39 744 aaPredicted RBP12.34□□□□□ -0.43
APTX-201ENST00000309615 N4BP2L2Q92802 583 aaPredicted RBP12.34□□□□□ -0.43
APTX-201ENST00000309615 USP7Q93009 1102 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 SLC46A1Q96NT5 459 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 OR2A5Q96R48 311 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 NOL11Q9H8H0 719 aaKnown RBP12.34□□□□□ -0.43
APTX-201ENST00000309615 PELI2Q9HAT8 420 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 MLXIPLQ9NP71 852 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 GEMIN8Q9NWZ8 242 aaKnown RBP12.34□□□□□ -0.43
APTX-201ENST00000309615 MID2Q9UJV3 735 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 PLCL2Q9UPR0 1127 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 B3GALT1Q9Y5Z6 326 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 ASPMQ8IZT6 3477 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 C9orf172C9J069 976 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 H3BMH7 237 aa12.34□□□□□ -0.43
APTX-201ENST00000309615 KATNA1O75449 491 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms