RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 VARSP26640 1264 aaKnown RBP18.59■□□□□ 0.57
LIME1-201ENST00000309546 ABATP80404 500 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 MRPL49Q13405 166 aaKnown RBP18.59■□□□□ 0.57
LIME1-201ENST00000309546 BBS9Q3SYG4 887 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 SPANXN3Q5MJ09 141 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 UGT3A1Q6NUS8 523 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 IGFL3Q6UXB1 125 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 PCGF5Q86SE9 256 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 C2CD4AQ8NCU7 369 aaPredicted RBP18.59■□□□□ 0.57
LIME1-201ENST00000309546 OR11G2Q8NGC1 345 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 C19orf60Q96EN9 201 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 MMABQ96EY8 250 aaPredicted RBP18.59■□□□□ 0.57
LIME1-201ENST00000309546 MESP1Q9BRJ9 268 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 CCDC177Q9NQR7 707 aaPredicted RBP18.59■□□□□ 0.57
LIME1-201ENST00000309546 TRPC4Q9UBN4 977 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 CDC14AQ9UNH5 594 aa18.59■□□□□ 0.57
LIME1-201ENST00000309546 TTC4O95801 387 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 STATHP02808 62 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 ANXA5P08758 320 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 ACPPP15309 386 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 SKIV2L2P42285 1042 aaKnown RBP18.58■□□□□ 0.56
LIME1-201ENST00000309546 RGS4P49798 205 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 TBPL1P62380 186 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 HIF1AQ16665 826 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 MSS51Q4VC12 460 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 HP1BP3Q5SSJ5 553 aaPredicted RBP18.58■□□□□ 0.56
LIME1-201ENST00000309546 RBM20Q5T481 1227 aaKnown RBP18.58■□□□□ 0.56
LIME1-201ENST00000309546 AGAP7PQ5VUJ5 663 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 LRRC8EQ6NSJ5 796 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 KLHL7Q8IXQ5 586 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 LRRC56Q8IYG6 542 aaPredicted RBP18.58■□□□□ 0.56
LIME1-201ENST00000309546 CISD2Q8N5K1 135 aaKnown RBP18.58■□□□□ 0.56
LIME1-201ENST00000309546 C8orf44Q96CB5 159 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 SNRNP40Q96DI7 357 aaKnown RBP18.58■□□□□ 0.56
LIME1-201ENST00000309546 THOC3Q96J01 351 aaKnown RBP18.58■□□□□ 0.56
LIME1-201ENST00000309546 AGAP4Q96P64 663 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 OR2A5Q96R48 311 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 EBNA1BP2Q99848 306 aaKnown RBP18.58■□□□□ 0.56
LIME1-201ENST00000309546 ZNF160Q9HCG1 818 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 PPANQ9NQ55 473 aaKnown RBP18.58■□□□□ 0.56
LIME1-201ENST00000309546 TAS2R13Q9NYV9 303 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 SLC17A6Q9P2U8 582 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 ADAMTS6Q9UKP5 1117 aa18.58■□□□□ 0.56
LIME1-201ENST00000309546 A0A0A6YYC8 382 aaPredicted RBP18.57■□□□□ 0.56
LIME1-201ENST00000309546 H7BY64 318 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 I3L1I5 382 aaPredicted RBP18.57■□□□□ 0.56
LIME1-201ENST00000309546 EIF3FO00303 357 aaPredicted RBP18.57■□□□□ 0.56
LIME1-201ENST00000309546 P2RX6O15547 441 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 GLRBP48167 497 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 EMP3P54852 163 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 DSG2Q14126 1118 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 MBOAT1Q6ZNC8 495 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 PALM2Q8IXS6 379 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 MYO1HQ8N1T3 1032 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 MCOLN3Q8TDD5 553 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 EEF1AKMT1Q8WVE0 214 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 SLCO2A1Q92959 643 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 ALKBH8Q96BT7 664 aaKnown RBP18.57■□□□□ 0.56
LIME1-201ENST00000309546 MVB12AQ96EY5 273 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 CERS2Q96G23 380 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 CFAP36Q96G28 342 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 CNDP1Q96KN2 507 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 PRAP1Q96NZ9 151 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 WDR77Q9BQA1 342 aaPredicted RBP18.57■□□□□ 0.56
LIME1-201ENST00000309546 LHPPQ9H008 270 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 DRC3Q9H069 523 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 ASF1BQ9NVP2 202 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 CSAG2Q9Y5P2 127 aa18.57■□□□□ 0.56
LIME1-201ENST00000309546 RP1L1Q8IWN7 2480 aaPredicted RBP18.57■□□□□ 0.56
LIME1-201ENST00000309546 IGLV3-12A0A075B6K2 115 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 USP27XA6NNY8 438 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 TXNDC9O14530 226 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 HPP00738 406 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 C8GP07360 202 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 GABRB3P28472 473 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 CDKN2DP55273 166 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 TIAL1Q01085 375 aaKnown RBP eCLIP18.56■□□□□ 0.56
LIME1-201ENST00000309546 EEF1A2Q05639 463 aaKnown RBP18.56■□□□□ 0.56
LIME1-201ENST00000309546 Q0VFX4 171 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 NR6A1Q15406 480 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 EIF2S3LQ2VIR3 472 aaKnown RBP18.56■□□□□ 0.56
LIME1-201ENST00000309546 GARNL3Q5VVW2 1013 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 FAAH2Q6GMR7 532 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 PAQR3Q6TCH7 311 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 Q6ZS92 163 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 CUZD1Q86UP6 607 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 LAPTM4BQ86VI4 370 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 IGDCC3Q8IVU1 814 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 LINGO1Q96FE5 620 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 NAT9Q9BTE0 207 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 ATG10Q9H0Y0 220 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 EPS8L2Q9H6S3 715 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 LRRC4CQ9HCJ2 640 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 C14orf105Q9NVL8 296 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 CHMP2BQ9UQN3 213 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 PDE10AQ9Y233 779 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 LRRK2Q5S007 2527 aa18.56■□□□□ 0.56
LIME1-201ENST00000309546 IDSB3KWA1 339 aa18.55■□□□□ 0.56
LIME1-201ENST00000309546 EMP2P54851 167 aa18.55■□□□□ 0.56
LIME1-201ENST00000309546 GNG11P61952 73 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms