RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 MRPL46Q9H2W6 279 aaKnown RBP21.19■□□□□ 0.98
SNUPN-201ENST00000308588 CPSF2Q9P2I0 782 aaKnown RBP21.19■□□□□ 0.98
SNUPN-201ENST00000308588 DCDC2Q9UHG0 476 aa21.19■□□□□ 0.98
SNUPN-201ENST00000308588 KCNE2Q9Y6J6 123 aa21.19■□□□□ 0.98
SNUPN-201ENST00000308588 LOC105369274A0A096LPK9 316 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 LOC102723532A0A0G2JNH3 316 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 HAT1O14929 419 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 KIAA0754O94854 1291 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 GSTA1P08263 222 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 GFAPP14136 432 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 EZRP15311 586 aaKnown RBP21.18■□□□□ 0.98
SNUPN-201ENST00000308588 ACACAQ13085 2346 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 SETDB1Q15047 1291 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 C16orf46Q6P387 395 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 TIPARPQ7Z3E1 657 aaKnown RBP21.18■□□□□ 0.98
SNUPN-201ENST00000308588 PLD3Q8IV08 490 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 OR4N4Q8N0Y3 316 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 OR4K1Q8NGD4 311 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 CNTNAP3BQ96NU0 1288 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 CNTNAP3Q9BZ76 1288 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 DNAJC11Q9NVH1 559 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 DYRK1BQ9Y463 629 aa21.18■□□□□ 0.98
SNUPN-201ENST00000308588 ACACBO00763 2458 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 STMND1H3BQB6 276 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 SRPX2O60687 465 aaPredicted RBP21.17■□□□□ 0.98
SNUPN-201ENST00000308588 SCRG1O75711 98 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 OR2B3O76000 313 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 DLGAP3O95886 979 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 KRT4P19013 534 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 ALDH18A1P54886 795 aaKnown RBP21.17■□□□□ 0.98
SNUPN-201ENST00000308588 SLC18A2Q05940 514 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 CDC16Q13042 620 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 KRT71Q3SY84 523 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 TRABD2AQ86V40 505 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 TMEM126BQ8IUX1 230 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 GPR135Q8IZ08 494 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 SLC38A9Q8NBW4 561 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 OR2A5Q96R48 311 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 SELENOSQ9BQE4 189 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 ENAMQ9NRM1 1142 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 PCDHB3Q9Y5E6 796 aa21.17■□□□□ 0.98
SNUPN-201ENST00000308588 E7EQ34 232 aa21.16■□□□□ 0.98
SNUPN-201ENST00000308588 CCNT2O60583 730 aaKnown RBP21.16■□□□□ 0.98
SNUPN-201ENST00000308588 NTRK1P04629 796 aa21.16■□□□□ 0.98
SNUPN-201ENST00000308588 CCR8P51685 355 aa21.16■□□□□ 0.98
SNUPN-201ENST00000308588 NXPE4Q6UWF7 544 aa21.16■□□□□ 0.98
SNUPN-201ENST00000308588 LRRC70Q7Z2Q7 622 aa21.16■□□□□ 0.98
SNUPN-201ENST00000308588 C4orf33Q8N1A6 199 aa21.16■□□□□ 0.98
SNUPN-201ENST00000308588 ZNF248Q8NDW4 579 aa21.16■□□□□ 0.98
SNUPN-201ENST00000308588 RAXQ9Y2V3 346 aa21.16■□□□□ 0.98
SNUPN-201ENST00000308588 DMXL2Q8TDJ6 3036 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 TEX51A0A1B0GUA7 166 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 FEZF1A0PJY2 475 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 LRRC14BA6NHZ5 514 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 H0YGG7 62 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 ZNF749O43361 778 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 GLRA3O75311 464 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 GNAZP19086 355 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 EPORP19235 508 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 CRHR1P34998 444 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 VSX2P58304 361 aaPredicted RBP21.15■□□□□ 0.98
SNUPN-201ENST00000308588 ARF3P61204 181 aaPredicted RBP21.15■□□□□ 0.98
SNUPN-201ENST00000308588 TGIF1Q15583 401 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 SLCO4C1Q6ZQN7 724 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 TMPRSS11BQ86T26 416 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 ZNF655Q8N720 491 aaPredicted RBP21.15■□□□□ 0.98
SNUPN-201ENST00000308588 PTGR2Q8N8N7 351 aaPredicted RBP21.15■□□□□ 0.98
SNUPN-201ENST00000308588 NAF1Q96HR8 494 aaKnown RBP21.15■□□□□ 0.98
SNUPN-201ENST00000308588 PELI2Q9HAT8 420 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 STARD5Q9NSY2 213 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 GPRC5BQ9NZH0 403 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 EMCNQ9ULC0 261 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 TMCO1Q9UM00 188 aa21.15■□□□□ 0.98
SNUPN-201ENST00000308588 URB1O60287 2271 aaKnown RBP21.15■□□□□ 0.98
SNUPN-201ENST00000308588 MDC1Q14676 2089 aaKnown RBP21.15■□□□□ 0.98
SNUPN-201ENST00000308588 K7EPI3 171 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 ZSCAN9O15535 394 aaPredicted RBP21.14■□□□□ 0.98
SNUPN-201ENST00000308588 LCMT2O60294 686 aaKnown RBP21.14■□□□□ 0.98
SNUPN-201ENST00000308588 PRAMEF4O60810 478 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 SMIM24O75264 130 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 SIX3O95343 332 aaPredicted RBP21.14■□□□□ 0.98
SNUPN-201ENST00000308588 LIPCP11150 499 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 EIF2S3P41091 472 aaKnown RBP21.14■□□□□ 0.98
SNUPN-201ENST00000308588 GCGRP47871 477 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 CCT5P48643 541 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 MEF2AQ02078 507 aaPredicted RBP21.14■□□□□ 0.98
SNUPN-201ENST00000308588 PCBP2Q15366 365 aaKnown RBP eCLIP21.14■□□□□ 0.98
SNUPN-201ENST00000308588 PDK4Q16654 411 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 TCTE1Q5JU00 501 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 WASHC2DQ5SRD0 308 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 CEP85LQ5SZL2 805 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 PRAMEF9Q5VWM5 478 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 TLDC1Q6P9B6 456 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 LRIG3Q6UXM1 1119 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 SNX31Q8N9S9 440 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 GALNT6Q8NCL4 622 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 PHF21BQ96EK2 531 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 SARGQ9BW04 601 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 CAPS2Q9BXY5 557 aa21.14■□□□□ 0.98
SNUPN-201ENST00000308588 SPNS1Q9H2V7 528 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms