RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PLD3Q8IV08 490 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 ANKMY2Q8IV38 441 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 RBMXL3Q8N7X1 1067 aaKnown RBP18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 NACC2Q96BF6 587 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 LINGO1Q96FE5 620 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 SGPP1Q9BX95 441 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 ZNF552Q9H707 407 aaPredicted RBP18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 SMYD2Q9NRG4 433 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 PLAAQ9Y263 795 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 HIVEP3Q5T1R4 2406 aa18.89■□□□□ 0.61
PDZRN3-202ENST00000308537 CLEC18AA5D8T8 446 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 A6NL46 340 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 AGPSO00116 658 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 SLC16A5O15375 505 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 FOXS1O43638 330 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 C1QAP02745 245 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 EIF2S1P05198 315 aaKnown RBP18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 C8GP07360 202 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 PAFAH1B1P43034 410 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 EFNA3P52797 238 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 ARL4CP56559 192 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 TSTA3Q13630 321 aaPredicted RBP18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 UGT3A1Q6NUS8 523 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 PRMT9Q6P2P2 845 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 CLEC18BQ6UXF7 455 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 SHISA6Q6ZSJ9 500 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 SHISA5Q8N114 240 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 CSNK1A1LQ8N752 337 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 AMER3Q8N944 861 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 CLEC18CQ8NCF0 446 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 FBXO36Q8NEA4 188 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 SPATA4Q8NEY3 305 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 CCDC138Q96M89 665 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 SOX17Q9H6I2 414 aaPredicted RBP18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 PARVBQ9HBI1 364 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 GPR83Q9NYM4 423 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 GRHL1Q9NZI5 618 aa18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 CORO1CQ9ULV4 474 aaPredicted RBP18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 MRPS2Q9Y399 296 aaKnown RBP18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 USP9YO00507 2555 aaPredicted RBP18.88■□□□□ 0.61
PDZRN3-202ENST00000308537 H7BY64 318 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 RAD51CO43502 376 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 CCNDBP1O95273 360 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 RGS4P49798 205 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 CSNK1G2P78368 415 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 SRSF1Q07955 248 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 PDIA2Q13087 525 aaKnown RBP18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 RAPSNQ13702 412 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 MYBPC3Q14896 1274 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 MUM1Q2TAK8 710 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 AGTRAPQ6RW13 159 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 SBSNQ6UWP8 590 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 ZC3HC1Q86WB0 502 aaKnown RBP18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 GALNT16Q8N428 558 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 STT3BQ8TCJ2 826 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 PDLIM5Q96HC4 596 aaKnown RBP18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 FER1L6-AS2Q96M78 137 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 PRAP1Q96NZ9 151 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 ZNF304Q9HCX3 659 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 CCDC177Q9NQR7 707 aaPredicted RBP18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 SCN3AQ9NY46 2000 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 VWA7Q9Y334 891 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 ZNF451Q9Y4E5 1061 aa18.87■□□□□ 0.61
PDZRN3-202ENST00000308537 KCNE1BA0A087WTH5 132 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 ALOX12BO75342 701 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 WISP3O95389 354 aaPredicted RBP18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 PIM1P11309 404 aaPredicted RBP18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 SLC26A3P40879 764 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 KLC1Q07866 573 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 PPP1R3AQ16821 1122 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 VWA2Q5GFL6 755 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 PRAMEF13Q5VWM6 474 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 FAM45BPQ6NSW5 357 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 LAPTM4BQ86VI4 370 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 GPATCH11Q8N954 259 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 FAM45AQ8TCE6 357 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 MCOLN3Q8TDD5 553 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 MVB12AQ96EY5 273 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 ERP44Q9BS26 406 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 ATG10Q9H0Y0 220 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 ZBTB20Q9HC78 741 aaPredicted RBP18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 ABCF3Q9NUQ8 709 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 TMEM184CQ9NVA4 438 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 FBXL4Q9UKA2 621 aa18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 NXT1Q9UKK6 140 aaKnown RBP18.86■□□□□ 0.61
PDZRN3-202ENST00000308537 PIAS1O75925 651 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 ZGLP1P0C6A0 271 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 NPPBP16860 134 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 ZNF37AP17032 561 aaPredicted RBP18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 ETF1P62495 437 aaKnown RBP18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 MGAT5Q09328 741 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 Q0VFX4 171 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 NAE1Q13564 534 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 DSG2Q14126 1118 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 VWA5B1Q5TIE3 1220 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 GARNL3Q5VVW2 1013 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 DUPD1Q68J44 220 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 SLC6A19Q695T7 634 aa18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 JMJD6Q6NYC1 403 aaPredicted RBP18.85■□□□□ 0.61
PDZRN3-202ENST00000308537 IGFL3Q6UXB1 125 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms