RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 APLP1P51693 650 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 DCUN1D3Q8IWE4 304 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 OR10T2Q8NGX3 314 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 DPYSL5Q9BPU6 564 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 PLEKHA1Q9HB21 404 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 POFUT2Q9Y2G5 429 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 NUP98P52948 1817 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 MYADML2A6NDP7 307 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 NPPAP01160 153 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 GSTM3P21266 225 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 AHCYP23526 432 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 CTSOP43234 321 aaPredicted RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 AP3S2P59780 193 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 BTN3A2P78410 334 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 CDK6Q00534 326 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ABHD18Q0P651 414 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 PLEKHS1Q5SXH7 462 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 USP43Q70EL4 1123 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ADGRG6Q86SQ4 1221 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ZNF296Q8WUU4 475 aaPredicted RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 POF1BQ8WVV4 589 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 IRF7Q92985 503 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 PSKH2Q96QS6 385 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 HAPLN2Q9GZV7 340 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ELAC1Q9H777 363 aaKnown RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 MAGEE1Q9HCI5 957 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 MED31Q9Y3C7 131 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 TRBC2A0A5B9 178 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 DAPL1A0PJW8 107 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ELOA3DA6NLF2 546 aaPredicted RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 OPN1SWP03999 348 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 DLDP09622 509 aaKnown RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 LEPRP48357 1165 aaKnown RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 NRIP1P48552 1158 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ATP4BP51164 291 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 PPP3R1P63098 170 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ELOA3BQ3SY89 546 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ZNF554Q86TJ5 538 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ELOA3Q8NG57 546 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 OR9A1PQ8NGU1 263 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 KCNA7Q96RP8 456 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 STRA6Q9BX79 667 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 YTHDF1Q9BYJ9 559 aaKnown RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 ABI3Q9P2A4 366 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 PCDHB11Q9Y5F2 797 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 CLCA3PQ9Y6N3 262 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 MYH6P13533 1939 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 GJB5O95377 273 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 BCHEP06276 602 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 ACVR2AP27037 513 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 MLLT3P42568 568 aaPredicted RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 STARP49675 285 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 SMCO1Q147U7 214 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 GPRIN1Q7Z2K8 1008 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 PLD6Q8N2A8 252 aaKnown RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 C9orf43Q8TAL5 461 aaPredicted RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 JSRP1Q96MG2 331 aaPredicted RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 PAAF1Q9BRP4 392 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 POLR2J2Q9GZM3 115 aaKnown RBP15.5■□□□□ 0.07
USP42-201ENST00000306177 PDLIM7Q9NR12 457 aa15.5■□□□□ 0.07
USP42-201ENST00000306177 H1F0P07305 194 aaKnown RBP15.49■□□□□ 0.07
USP42-201ENST00000306177 FGF3P11487 239 aaPredicted RBP15.49■□□□□ 0.07
USP42-201ENST00000306177 HOXB2P14652 356 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 TOR1AIP1Q5JTV8 583 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 ADNP2Q6IQ32 1131 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 TRIM2Q9C040 744 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 E7ESA3 106 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 PDLIM1O00151 329 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 NRG3P56975 720 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 NFATC2Q13469 925 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 GPR68Q15743 365 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 OLFML2AQ68BL7 652 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 RPS27LQ71UM5 84 aaKnown RBP15.49■□□□□ 0.07
USP42-201ENST00000306177 ADGRD2Q7Z7M1 963 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 PIK3R3Q92569 461 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 DGAT2Q96PD7 388 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 RNF186Q9NXI6 227 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 RENP00797 406 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 RPS13P62277 151 aaKnown RBP15.49■□□□□ 0.07
USP42-201ENST00000306177 RPP38P78345 283 aaKnown RBP15.49■□□□□ 0.07
USP42-201ENST00000306177 RHDQ02161 417 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 CWF19L1Q69YN2 538 aaKnown RBP15.49■□□□□ 0.07
USP42-201ENST00000306177 ZNF527Q8NB42 609 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 FAM46DQ8NEK8 389 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 TMEM40Q8WWA1 233 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 LRCH3Q96II8 777 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 MRGPRX2Q96LB1 330 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 TPT1P8Q9HAU6 139 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 TMEM98Q9Y2Y6 226 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 PRODHO43272 600 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 CNMDO75829 334 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 ADH1BP00325 375 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 GNALP38405 381 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 TIGD6Q17RP2 521 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 SPANXN4Q5MJ08 99 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 OGFOD2Q6N063 350 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 ALKBH2Q6NS38 261 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 NPAS3Q8IXF0 933 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 LINC00471Q8N535 108 aa15.49■□□□□ 0.07
USP42-201ENST00000306177 TXNDC5Q8NBS9 432 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms