RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 LIPEQ05469 1076 aa14□□□□□ -0.17
SHCBP1-201ENST00000303383 NFATC4Q14934 902 aa14□□□□□ -0.17
SHCBP1-201ENST00000303383 C10orf62Q5T681 223 aaPredicted RBP14□□□□□ -0.17
SHCBP1-201ENST00000303383 C8orf82Q6P1X6 216 aaPredicted RBP14□□□□□ -0.17
SHCBP1-201ENST00000303383 XKR5Q6UX68 686 aa14□□□□□ -0.17
SHCBP1-201ENST00000303383 Q6ZS52 159 aa14□□□□□ -0.17
SHCBP1-201ENST00000303383 TRIM69Q86WT6 500 aa14□□□□□ -0.17
SHCBP1-201ENST00000303383 CGREF1Q99674 301 aa14□□□□□ -0.17
SHCBP1-201ENST00000303383 EHD1Q9H4M9 534 aa14□□□□□ -0.17
SHCBP1-201ENST00000303383 CYP8B1Q9UNU6 501 aa14□□□□□ -0.17
SHCBP1-201ENST00000303383 SERTM1A2A2V5 107 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 ANKDD1BA6NHY2 528 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 ACOT8O14734 319 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 COX7A2P14406 83 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 PRPS1L1P21108 318 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 TACR1P25103 407 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 GRAMD1BQ3KR37 738 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 SPIN4Q56A73 249 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 TMIGD1Q6UXZ0 262 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 PRR23BQ6ZRT6 265 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 DPP10Q8N608 796 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 AIF1LQ9BQI0 150 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 ABCD2Q9UBJ2 740 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 SH2B3Q9UQQ2 575 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 A0A1W2PPC1 479 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 OR52A4PA6NMU1 304 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 RASGRP1O95267 797 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 TGFB1P01137 390 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 ANXA4P09525 319 aaPredicted RBP13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 KIAA1024LP59773 190 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 UBXN2BQ14CS0 331 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 AASDHQ4L235 1098 aaPredicted RBP13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 CAPRIN2Q6IMN6 1127 aaKnown RBP13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 LPCAT2Q7L5N7 544 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 TMEM125Q96AQ2 219 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 PPWD1Q96BP3 646 aaKnown RBP13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 RAB11FIP5Q9BXF6 653 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 PRDM8Q9NQV8 689 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 SPATA6Q9NWH7 488 aaPredicted RBP13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 FBXL21Q9UKT6 434 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 PCM1Q15154 2024 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 UAP1L1Q3KQV9 507 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 ADNP2Q6IQ32 1131 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 PTCRAQ6ISU1 281 aaPredicted RBP13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 TSTD1Q8NFU3 115 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 STARD8Q92502 1023 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 TSACCQ96A04 125 aaPredicted RBP13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 ITCHQ96J02 903 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 EGLN2Q96KS0 407 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 ANKRD27Q96NW4 1050 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 CAMK1GQ96NX5 476 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 PRPF18Q99633 342 aaKnown RBP13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 SH3GL1Q99961 368 aa13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 COPS7BQ9H9Q2 264 aaPredicted RBP13.99□□□□□ -0.17
SHCBP1-201ENST00000303383 HSD17B1P14061 328 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 KIR3DL1P43629 444 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 GSK3BP49841 420 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 EEFSECP57772 596 aaKnown RBP13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 MTPNP58546 118 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 PCDH1Q08174 1060 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 SMAD2Q15796 467 aaKnown RBP13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 SPATS1Q496A3 300 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 PQLC1Q8N2U9 271 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 NRG4Q8WWG1 115 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 XKR8Q9H6D3 395 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 LMAN1LQ9HAT1 526 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 SLC2A4RGQ9NR83 387 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 MRPS17Q9Y2R5 130 aaKnown RBP13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 PCDHA9Q9Y5H5 950 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 HEBP2Q9Y5Z4 205 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 COLEC10Q9Y6Z7 277 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 GSTA4O15217 222 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 GCKP35557 465 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 ACTR1BP42025 376 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 ASMTP46597 345 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 ACTR1AP61163 376 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 LRRC32Q14392 662 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 DPY19L1Q2PZI1 675 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 WLSQ5T9L3 541 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 ANKRD46Q86W74 232 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 KIAA2013Q8IYS2 634 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 PDXPQ96GD0 296 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 METTL2AQ96IZ6 378 aaKnown RBP13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 GBP5Q96PP8 586 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 MVB12BQ9H7P6 319 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 C6orf203Q9P0P8 240 aaPredicted RBP13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 AURKCQ9UQB9 309 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 AP4S1Q9Y587 144 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 CROCCQ5TZA2 2017 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 STK25O00506 426 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 RAB28P51157 221 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 CCR8P51685 355 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 SF1Q15637 639 aaKnown RBP13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 LRRC56Q8IYG6 542 aaPredicted RBP13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 TMEM132CQ8N3T6 1108 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 OR51B5Q9H339 312 aa13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 GMPR2Q9P2T1 348 aaKnown RBP13.98□□□□□ -0.17
SHCBP1-201ENST00000303383 SAP18O00422 153 aaKnown RBP13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 PCDH7O60245 1069 aa13.97□□□□□ -0.17
SHCBP1-201ENST00000303383 APBB3O95704 486 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms