RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ZFP69Q49AA0 526 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 RAB41Q5JT25 222 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 CLLU1OSQ5K130 101 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 USP30Q70CQ3 517 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 DEPDC4Q8N2C3 294 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 CLIP3Q96DZ5 547 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 C1orf74Q96LT6 269 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 COL21A1Q96P44 957 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 SUV39H2Q9H5I1 410 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 IL26Q9NPH9 171 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 TRPV5Q9NQA5 729 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 ASAH2Q9NR71 780 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 ANGPT4Q9Y264 503 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 CXCL14O95715 111 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 ETFAP13804 333 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 PAICSP22234 425 aaKnown RBP12.91□□□□□ -0.34
CASC4-201ENST00000299957 KDELR2P33947 212 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 SSR2P43308 183 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 NR4A2P43354 598 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 ANGPT1Q15389 498 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 TIMM50Q3ZCQ8 353 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 GCNT6Q5T4J0 391 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 CSGALNACT1Q8TDX6 532 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 RHNO1Q9BSD3 238 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 PTGFRNQ9P2B2 879 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 CCDC182A6NF36 153 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 PRR23D1E9PI22 279 aaPredicted RBP12.91□□□□□ -0.34
CASC4-201ENST00000299957 CAPN15O75808 1086 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 PRR23D2P0DMB1 279 aaPredicted RBP12.91□□□□□ -0.34
CASC4-201ENST00000299957 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
CASC4-201ENST00000299957 SELPP16109 830 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 PSMA1P25786 263 aaKnown RBP12.91□□□□□ -0.34
CASC4-201ENST00000299957 ETV3P41162 512 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 IL12RB1P42701 662 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 TAS2R50P59544 299 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 AP1S1P61966 158 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 ARHGAP15Q53QZ3 475 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 DPY19L3Q6ZPD9 716 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 DCDC5Q6ZRR9 648 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 NCCRP1Q6ZVX7 275 aaPredicted RBP12.91□□□□□ -0.34
CASC4-201ENST00000299957 CNTN4Q8IWV2 1026 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 PELI3Q8N2H9 469 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 Q8N9G6 341 aaPredicted RBP12.91□□□□□ -0.34
CASC4-201ENST00000299957 LKAAEAR1Q8TD35 194 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 ITFG2Q969R8 447 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 ACDQ96AP0 544 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 TTTY10Q9BZA0 68 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 SSR3Q9UNL2 185 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 ABCG2Q9UNQ0 655 aa12.91□□□□□ -0.34
CASC4-201ENST00000299957 H3BSH0 61 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 UGT2B15P54855 530 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 MLLT1Q03111 559 aaPredicted RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 FOXM1Q08050 763 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 CLCA4Q14CN2 919 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 C5orf22Q49AR2 442 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 SOWAHCQ53LP3 525 aaPredicted RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 MFSD4BQ5TF39 518 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 TMPRSS11AQ6ZMR5 421 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 NXPE1Q8N323 547 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 ZFP41Q8N8Y5 198 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 AQP11Q8NBQ7 271 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 RPRD1BQ9NQG5 326 aaKnown RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 RAD18Q9NS91 495 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 POU2F3Q9UKI9 436 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 RNF6Q9Y252 685 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 BCHEP06276 602 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 BPIP17213 487 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 GGT1P19440 569 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 MAGEA10P43363 369 aaPredicted RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 HK3P52790 923 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 ABHD18Q0P651 414 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 FAM214AQ32MH5 1076 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 ZNF404Q494X3 552 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 CAPN13Q6MZZ7 669 aaPredicted RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 PLEKHM3Q6ZWE6 761 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 TMEM173Q86WV6 379 aaPredicted RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 RNF130Q86XS8 419 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 RAB42Q8N4Z0 105 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 MS4A4AQ96JQ5 239 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 RNF38Q9H0F5 515 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 ZBTB20Q9HC78 741 aaPredicted RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 FAIMQ9NVQ4 179 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 AHSPQ9NZD4 102 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 CD300AQ9UGN4 299 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 IL20RAQ9UHF4 553 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 AHDC1Q5TGY3 1603 aaPredicted RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 KRBA1A5PL33 1030 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 C8orf89P0DMQ9 161 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 CYP2A6P11509 494 aaPredicted RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 HLA-EP13747 358 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 PRPS1L1P21108 318 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 ATP4BP51164 291 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 IFI44LQ53G44 452 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 C9orf64Q5T6V5 341 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 NADSYN1Q6IA69 706 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 AGTRAPQ6RW13 159 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 TICAM1Q8IUC6 712 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 ZZZ3Q8IYH5 903 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 OR2AP1Q8NGE2 309 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms