RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CLDN25C9JDP6 229 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 IRAK2O43187 625 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CDH1P12830 882 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HTR7P34969 479 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RPS13P62277 151 aaKnown RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TEAD2Q15562 447 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KLHL22Q53GT1 634 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZNF101Q8IZC7 436 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CLDN19Q8N6F1 224 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 AQP11Q8NBQ7 271 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PHC3Q8NDX5 983 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LMX1AQ8TE12 382 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 WDR77Q9BQA1 342 aaPredicted RBP13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ZDHHC3Q9NYG2 299 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ABI3Q9P2A4 366 aa13.23□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PI15O43692 258 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CDC123O75794 336 aaPredicted RBP13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MRPL3P09001 348 aaKnown RBP13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ALPPL2P10696 532 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LRP8Q14114 963 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MSS51Q4VC12 460 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 METTL21CQ5VZV1 264 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MBOAT1Q6ZNC8 495 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OXR1Q8N573 874 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RGMAQ96B86 450 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SLC6A15Q9H2J7 730 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR51B5Q9H339 312 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 P2RX2Q9UBL9 471 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ADGRB2O60241 1585 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TLX3O43711 291 aaPredicted RBP13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HK1P19367 917 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 NRG3P56975 720 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FKBP1BP68106 108 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PDGFRLQ15198 375 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 KIAA0930Q6ICG6 404 aaPredicted RBP13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MSANTD1Q6ZTZ1 278 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GATSQ8NAP1 163 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SLC22A8Q8TCC7 542 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TMEM209Q96SK2 561 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GLTPD2A6NH11 291 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SAGE2PA6NJ88 616 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 AURKAO14965 403 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ORC5O43913 435 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 APOC1P02654 83 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 BNIP3Q12983 259 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LRRC66Q68CR7 880 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 JAGN1Q8N5M9 183 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GLIS1Q8NBF1 620 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR8S1Q8NH09 359 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR8K3Q8NH51 312 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 C1orf216Q8TAB5 229 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PKP2Q99959 881 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LRRC3Q9BY71 257 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 EIF2B3Q9NR50 452 aaKnown RBP13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 YIPF1Q9Y548 306 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TRBC2A0A5B9 178 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 E7EQ34 232 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 EOMESO95936 686 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR1E2P47887 323 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PREPP48147 710 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PITPNAQ00169 270 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 BLMHQ13867 455 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 WSCD2Q2TBF2 565 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PDCD4Q53EL6 469 aaKnown RBP13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CMTM8Q8IZV2 173 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GJD3Q8N144 294 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 STON2Q8WXE9 905 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FBXL20Q96IG2 436 aa13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 NUSAP1Q9BXS6 441 aaKnown RBP13.22□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ACOX3O15254 700 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TNFP01375 233 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 AGTR2P50052 363 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 WDR4P57081 412 aaKnown RBP13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 SLC35F1Q5T1Q4 408 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OGFRL1Q5TC84 451 aaPredicted RBP13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 NUDT13Q86X67 352 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GALNT11Q8NCW6 608 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ASB12Q8WXK4 309 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MOCOSQ96EN8 888 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 MROH1Q8NDA8 1641 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 C13orf42A0A1B0GVH6 325 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR6C70A6NIJ9 312 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GABRDO14764 452 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 C6orf47O95873 294 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CAPZA1P52907 286 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 PDPRQ8NCN5 879 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 OR52E4Q8NGH9 312 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TRPV4Q9HBA0 871 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TAS2R1Q9NYW7 299 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 FLRT1Q9NZU1 646 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 A0A1W2PRQ8 180 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 AHSGP02765 367 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 GSTT2BP0CG30 244 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TDRPQ86YL5 185 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 HAPLN3Q96S86 360 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 RMI1Q9H9A7 625 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 ANKRA2Q9H9E1 313 aa13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 LIN28AQ9H9Z2 209 aaKnown RBP13.21□□□□□ -0.29
CHRFAM7A-201ENST00000299847 TRIM64A6NGJ6 449 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms