RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 PCDH10Q9P2E7 1040 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 VPS29Q9UBQ0 182 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 TCRBV7S2A1N4TA0A589 114 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 NME6O75414 186 aaPredicted RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 HNRNPCP07910 306 aaKnown RBP eCLIP6.92□□□□□ -1.3
RAG1-201ENST00000299440 EDNRBP24530 442 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 PTPN4P29074 926 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 MNDAP41218 407 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 RPS13P62277 151 aaKnown RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 OLR1P78380 273 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 DCAF12Q5T6F0 453 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 SMYD5Q6GMV2 418 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 AAGABQ6PD74 315 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 TRAF7Q6Q0C0 670 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 C8orf59Q8N0T1 100 aaPredicted RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 CNEP1R1Q8N9A8 125 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 OR5L2Q8NGL0 311 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 TBC1D10AQ9BXI6 508 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 MRM3Q9HC36 420 aaKnown RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 SAMD4AQ9UPU9 718 aaKnown RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 hCG_1807616A0A1W2PRN6 198 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 RCCD1A6NED2 376 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 BTNL10A8MVZ5 291 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 BLOC1S5-TXNDC5H3BN57 136 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 PIP5K1BO14986 540 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 UBOX5O94941 541 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 ZCCHC18P0CG32 403 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 GJA4P35212 333 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 CCR10P46092 362 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 LIMK2P53671 638 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 CLRN1P58418 232 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 FCHO2Q0JRZ9 810 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 EGFLAMQ63HQ2 1017 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 KIAA0895LQ68EN5 471 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 KIAA0930Q6ICG6 404 aaPredicted RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 FIP1L1Q6UN15 594 aaKnown RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 NANOGNBQ7Z5D8 188 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 CEP97Q8IW35 865 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 TRAM1L1Q8N609 369 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 GTPBP3Q969Y2 492 aaKnown RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 CNDP2Q96KP4 475 aaKnown RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 TMEM74Q96NL1 305 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 PDCD10Q9BUL8 212 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 ARRDC1-AS1Q9H2J1 176 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 RDH14Q9HBH5 336 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 MCUBQ9NWR8 336 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 NALCNQ8IZF0 1738 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 COL2A1P02458 1487 aaPredicted RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 ISPDA4D126 451 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 H3BSH0 61 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 SOCS5O75159 536 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 ACADSP16219 412 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 CHRNB2P17787 502 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 IL1RNP18510 177 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 IRS1P35568 1242 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 GDF10P55107 478 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 OLIG2Q13516 323 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 TSC22D1Q15714 1073 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 IZUMO2Q6UXV1 221 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 ZNF540Q8NDQ6 660 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 ACTL8Q9H568 366 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 AP4S1Q9Y587 144 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 FEZF1A0PJY2 475 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 PTGESO14684 152 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 ENTPD5O75356 428 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 PFKLP17858 780 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 ENTPD1P49961 510 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 CDH12P55289 794 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 AP1S2P56377 157 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 ZNF33BQ06732 778 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 PTCHD3Q3KNS1 767 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 RALGPS1Q5JS13 557 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 TRMT10AQ8TBZ6 339 aaKnown RBP6.92□□□□□ -1.3
RAG1-201ENST00000299440 ART4Q93070 314 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 TMCO6Q96DC7 493 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 COL21A1Q96P44 957 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 SLC46A2Q9BY10 475 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 EHD3Q9NZN3 535 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 TESMINQ9Y4I5 508 aa6.92□□□□□ -1.3
RAG1-201ENST00000299440 A0A1B0GVT2 93 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 H3BQF6 201 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 TNFRSF11BO00300 401 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 IFNA6P05013 189 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 MED22Q15528 200 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 NIPAL1Q6NVV3 410 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CREG2Q8IUH2 290 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SLC34A3Q8N130 599 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 TMEM130Q8N3G9 435 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 TRPV1Q8NER1 839 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 APOOQ9BUR5 198 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 MVB12BQ9H7P6 319 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 MARCH7Q9H992 704 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SLC17A7Q9P2U7 560 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SLC17A6Q9P2U8 582 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 BTBD3Q9Y2F9 522 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 RPLP0P05388 317 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 PRPS2P11908 318 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 RNH1P13489 461 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 ACVR2AP27037 513 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 AFF3P51826 1226 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms