RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ROPN1BQ9BZX4 212 aaPredicted RBP25.76■■□□□ 1.71
SSU72-201ENST00000291386 ROPN1Q9HAT0 212 aaPredicted RBP25.76■■□□□ 1.71
SSU72-201ENST00000291386 RRAGDQ9NQL2 400 aaPredicted RBP25.76■■□□□ 1.71
SSU72-201ENST00000291386 DYRK1BQ9Y463 629 aa25.76■■□□□ 1.71
SSU72-201ENST00000291386 SUPT3HB4E1H0 165 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 UBXN8O00124 270 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 ZSCAN9O15535 394 aaPredicted RBP25.75■■□□□ 1.71
SSU72-201ENST00000291386 KLK10O43240 276 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 ZNF749O43361 778 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 SUPT3HO75486 399 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 STK16O75716 305 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 NTRK1P04629 796 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 CDH1P12830 882 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 SLCO1A2P46721 670 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 ABHD18Q0P651 414 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 PRAMEF17Q5VTA0 474 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 YOD1Q5VVQ6 348 aaPredicted RBP25.75■■□□□ 1.71
SSU72-201ENST00000291386 FRMPD2BQ6IN97 320 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 ADCK2Q7Z695 626 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 CACNA2D3Q8IZS8 1091 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 GALNT6Q8NCL4 622 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 NEIL2Q969S2 332 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 NAF1Q96HR8 494 aaKnown RBP25.75■■□□□ 1.71
SSU72-201ENST00000291386 DCBLD2Q96PD2 775 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 CAPS2Q9BXY5 557 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 ACTR5Q9H9F9 607 aaPredicted RBP25.75■■□□□ 1.71
SSU72-201ENST00000291386 PCMTD2Q9NV79 361 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 GPRC5BQ9NZH0 403 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 DMXL2Q8TDJ6 3036 aa25.75■■□□□ 1.71
SSU72-201ENST00000291386 KCNE1BA0A087WTH5 132 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 HAT1O14929 419 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 WDR47O94967 919 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 RORAP35398 523 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 GDF5P43026 501 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 CCR8P51685 355 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 RHBDD2Q6NTF9 364 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 ZNF517Q6ZMY9 492 aaPredicted RBP25.74■■□□□ 1.71
SSU72-201ENST00000291386 CYP4X1Q8N118 509 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 SLC38A9Q8NBW4 561 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 OR2W6PQ8NHA6 318 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 EXT2Q93063 718 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 THAP11Q96EK4 314 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 MRPL57Q9BQC6 102 aaKnown RBP25.74■■□□□ 1.71
SSU72-201ENST00000291386 TMEM109Q9BVC6 243 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 CD244Q9BZW8 370 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 PELI2Q9HAT8 420 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 SRPK3Q9UPE1 567 aa25.74■■□□□ 1.71
SSU72-201ENST00000291386 LOC105369274A0A096LPK9 316 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 LOC102723532A0A0G2JNH3 316 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 TEX51A0A1B0GUA7 166 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 CCNYL3P0C7X3 344 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 HSPA7P48741 367 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 RPS15AP62244 130 aaKnown RBP25.73■■□□□ 1.71
SSU72-201ENST00000291386 TLE3Q04726 772 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 GRM7Q14831 915 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 SH2D5Q6ZV89 423 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 LRRC70Q7Z2Q7 622 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 OR4N4Q8N0Y3 316 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 MRPL46Q9H2W6 279 aaKnown RBP25.73■■□□□ 1.71
SSU72-201ENST00000291386 SYNPO2LQ9H987 977 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 LHX9Q9NQ69 397 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 DNAJC11Q9NVH1 559 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 PADI1Q9ULC6 663 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 TMCO1Q9UM00 188 aa25.73■■□□□ 1.71
SSU72-201ENST00000291386 H0YGG7 62 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 GSTA1P08263 222 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 GNAZP19086 355 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 GRK3P35626 688 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 STAT5AP42229 794 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 ARSFP54793 590 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 EMP3P54852 163 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 ALDH18A1P54886 795 aaKnown RBP25.72■■□□□ 1.71
SSU72-201ENST00000291386 VSX2P58304 361 aaPredicted RBP25.72■■□□□ 1.71
SSU72-201ENST00000291386 ARF3P61204 181 aaPredicted RBP25.72■■□□□ 1.71
SSU72-201ENST00000291386 IFFO1Q0D2I5 559 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 CDC16Q13042 620 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 GPS2Q13227 327 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 SETDB1Q15047 1291 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 WASHC2DQ5SRD0 308 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 CATSPEREQ5SY80 951 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 DSELQ8IZU8 1212 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 TMEM151AQ8N4L1 468 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 ZNF655Q8N720 491 aaPredicted RBP25.72■■□□□ 1.71
SSU72-201ENST00000291386 CLIP3Q96DZ5 547 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 XPR1Q9UBH6 696 aa25.72■■□□□ 1.71
SSU72-201ENST00000291386 USP24Q9UPU5 2620 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 A0A1W2PPM1 405 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 SMIM23A6NLE4 172 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 KLK3P07288 261 aaPredicted RBP25.71■■□□□ 1.71
SSU72-201ENST00000291386 PYGBP11216 843 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 KRT15P19012 456 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 PRTGQ2VWP7 1150 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 ZNF385CQ66K41 422 aaPredicted RBP25.71■■□□□ 1.71
SSU72-201ENST00000291386 METTL2BQ6P1Q9 378 aaKnown RBP25.71■■□□□ 1.71
SSU72-201ENST00000291386 NXPE4Q6UWF7 544 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 IL22RA1Q8N6P7 574 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 TTC29Q8NA56 475 aaPredicted RBP25.71■■□□□ 1.71
SSU72-201ENST00000291386 PROKR1Q8TCW9 393 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 ESAMQ96AP7 390 aa25.71■■□□□ 1.71
SSU72-201ENST00000291386 SCYL1Q96KG9 808 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms