RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ALAS2P22557 587 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 RNF144AP50876 292 aaPredicted RBP14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 HNRNPA0Q13151 305 aaKnown RBP14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 C4orf46Q504U0 113 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 TUBA3EQ6PEY2 450 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 ATCAYQ86WG3 371 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 TMIGD2Q96BF3 282 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 NSUN3Q9H649 340 aaKnown RBP14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 HPF1Q9NWY4 346 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 AASSQ9UDR5 926 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 APOL3O95236 402 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 PHC3Q8NDX5 983 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 TTYH2Q9BSA4 534 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 MAU2Q9Y6X3 613 aa14.93□□□□□ -0.02
SHROOM4-201ENST00000289292 A0A0J9YVX5 310 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 PGDP52209 483 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 PITX1P78337 314 aaPredicted RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ZNF234Q14588 700 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ATP6AP1Q15904 470 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 SLITRK4Q8IW52 837 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 TOMM5Q8N4H5 51 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 HTATIP2Q9BUP3 242 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 PHF24Q9UPV7 400 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 RICTORQ6R327 1708 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 CMPK1P30085 196 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 PTGES3Q15185 160 aaKnown RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ZNF423Q2M1K9 1284 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 FAAH2Q6GMR7 532 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 OR14C36Q8NHC7 312 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 DENND1AQ8TEH3 1009 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 GEMIN6Q8WXD5 167 aaKnown RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ZUFSPQ96AP4 578 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 TXLNGYQ9BZA5 131 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ZNF451Q9Y4E5 1061 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 C2orf92A0A1B0GVN3 265 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 RPP14O95059 124 aaKnown RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 C6orf47O95873 294 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 JUNP05412 331 aaKnown RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 GKP32189 559 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 COL9A2Q14055 689 aaPredicted RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 GPR68Q15743 365 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 KIAA1614Q5VZ46 1190 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 SLC8B1Q6J4K2 584 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ALKBH2Q6NS38 261 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ZNF782Q6ZMW2 699 aaPredicted RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 DERL2Q9GZP9 239 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 KCPQ6ZWJ8 1503 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 J3QLW9 94 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ZNF19P17023 458 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 EDNRAP25101 427 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 GALNT2Q10471 571 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ODF4Q2M2E3 257 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 FRG2Q64ET8 278 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 HMGN2P46Q86SG4 172 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 THOC6Q86W42 341 aaKnown RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 RBM12BQ8IXT5 1001 aaKnown RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 COX18Q8N8Q8 333 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 FBXO22Q8NEZ5 403 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 FRG2BQ96QU4 278 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 HEPHQ9BQS7 1158 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 FXYD6-FXYD2A0A087WZ82 144 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 A0A0G2JPF8 293 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 HNRNPCL3B7ZW38 293 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 HNRNPCL4P0DMR1 293 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 AHCYP23526 432 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 C1QTNF8P60827 252 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 ARSIQ5FYB1 569 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 C1orf220Q5T0J3 134 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 RIOK2Q9BVS4 552 aaKnown RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 UCK2Q9BZX2 261 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 COMMD4Q9H0A8 199 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 FXYD6Q9H0Q3 95 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 FAM124BQ9H5Z6 455 aaPredicted RBP14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 MED11Q9P086 117 aa14.92□□□□□ -0.02
SHROOM4-201ENST00000289292 LOC100509620A0A075B734 347 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 OAS1P00973 400 aaKnown RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 CREMQ03060 361 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 KCNAB2Q13303 367 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 ZNF675Q8TD23 568 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 AKAP1Q92667 903 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 OSBPL2Q9H1P3 480 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 SMOXQ9NWM0 555 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 C12orf71A8MTZ7 269 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 RPS3P23396 243 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 CRISP3P54108 245 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 STXBP1P61764 594 aaKnown RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 PMS2P3Q13401 168 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 GALNT13Q8IUC8 556 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 PEX5LQ8IYB4 626 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 SETD6Q8TBK2 473 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 GPR151Q8TDV0 419 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 CYB5D2Q8WUJ1 264 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 ZBED6CLQ96FA7 236 aaPredicted RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 C12orf66Q96MD2 445 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 MYH10P35580 1976 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 DFNA5O60443 496 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 H1F0P07305 194 aaKnown RBP14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 CGB2Q6NT52 195 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 C14orf80Q86SX3 495 aa14.91□□□□□ -0.02
SHROOM4-201ENST00000289292 ALPK1Q96QP1 1244 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms