RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SEPT4O43236 478 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 ARSFP54793 590 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 FRG2Q64ET8 278 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 TXNDC5Q8NBS9 432 aaKnown RBP16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 FRG2BQ96QU4 278 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 GKN1Q9NS71 199 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 FKBP7Q9Y680 259 aa16.04■□□□□ 0.16
SH3RF1-201ENST00000284637 GM2AP17900 193 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 AKT2P31751 481 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 DIO3P55073 304 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC13A2Q13183 592 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 ZNF767PQ75MW2 155 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 ABHD11Q8NFV4 315 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 PYURFQ96I23 114 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 POFUT2Q9Y2G5 429 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 TRBC2A0A5B9 178 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 MND1Q9BWT6 205 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 OR2AG1Q9H205 316 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 NFAT5O94916 1531 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 LRRC72A6NJI9 287 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 SNAP29O95721 258 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 VIPP01282 170 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 FPR1P21462 350 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 KELP23276 732 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 CMPK1P30085 196 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 ACSL1P33121 698 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 SLBPQ14493 270 aaKnown RBP eCLIP16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 PTPRCAPQ14761 206 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 SPATS1Q496A3 300 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC15A3Q8IY34 581 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 LILRB4Q8NHJ6 448 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 TRIM2Q9C040 744 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 THUMPD1Q9NXG2 353 aaKnown RBP16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 PI15O43692 258 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 CSKP41240 450 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 C1QTNF8P60827 252 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 TSPAN5P62079 268 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 CBLBQ13191 982 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 DPY19L3Q6ZPD9 716 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 GALNT13Q8IUC8 556 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 LMO3Q8TAP4 145 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 KLHL6Q8WZ60 621 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 FATE1Q969F0 183 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC32A1Q9H598 525 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 CUEDC1Q9NWM3 386 aaPredicted RBP16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 PAK1IP1Q9NWT1 392 aaPredicted RBP16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 CHRNA1P02708 482 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 ALDOAP04075 364 aaKnown RBP16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 MYH10P35580 1976 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 NCBP2P52298 156 aaKnown RBP eCLIP16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 PAFAH1B3Q15102 231 aaKnown RBP16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 GOLGA7Q7Z5G4 137 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 OXR1Q8N573 874 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 BPIFB1Q8TDL5 484 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 PLD4Q96BZ4 506 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 HSH2DQ96JZ2 352 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 SLA2Q9H6Q3 261 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 ABCB8Q9NUT2 735 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 PCDH10Q9P2E7 1040 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 CEPT1Q9Y6K0 416 aa16.03■□□□□ 0.16
SH3RF1-201ENST00000284637 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 SCGNO76038 276 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC35G6P0C7Q6 338 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 STOMP27105 288 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 KHKP50053 298 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 DSTNP60981 165 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 ADAM8P78325 824 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 PCBP2Q15366 365 aaKnown RBP eCLIP16.02■□□□□ 0.161e-6■■■■■ 51.6
SH3RF1-201ENST00000284637 ULK3Q6PHR2 472 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 KLHL36Q8N4N3 616 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 LCN9Q8WX39 176 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 MGME1Q9BQP7 344 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 ADAP2Q9NPF8 381 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 HS3ST4Q9Y661 456 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 H3BMQ9 156 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 CDRT1O95170 752 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 C6orf141Q5SZD1 244 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 COX18Q8N8Q8 333 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 KCT2Q8NC54 265 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 OR14C36Q8NHC7 312 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 RBM18Q96H35 190 aaKnown RBP16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 COG8Q96MW5 612 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 TRMT61BQ9BVS5 477 aaKnown RBP16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 NSUN3Q9H649 340 aaKnown RBP16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 WDR6Q9NNW5 1121 aaKnown RBP16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 MRTO4Q9UKD2 239 aaKnown RBP16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 B3GNT3Q9Y2A9 372 aa16.02■□□□□ 0.16
SH3RF1-201ENST00000284637 NRP1O14786 923 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 PRAMEF12O95522 483 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 ALPPP05187 535 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 IGFALSP35858 605 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 PIGFQ07326 219 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 KCNJ8Q15842 424 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 IGFN1Q86VF2 1251 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 KIF18BQ86Y91 864 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 ZSWIM3Q96MP5 696 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF285Q96NJ3 590 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 ARHGDIBP52566 201 aa16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 RPL6Q02878 288 aaKnown RBP16.02■□□□□ 0.15
SH3RF1-201ENST00000284637 PMS2P3Q13401 168 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms