RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TBC1D3FA6NER0 549 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D3LB9A6J9 549 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 PLOD2O00469 737 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D3HP0C7X1 549 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 CDH1P12830 882 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 IST1P53990 364 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 IRX1P78414 480 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 RBBP5Q15291 538 aaKnown RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 IRF4Q15306 451 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 UGT8Q16880 541 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D3GQ6DHY5 549 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D3CQ6IPX1 549 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 GRHL2Q6ISB3 625 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 MED27Q6P2C8 311 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 PTRH1Q86Y79 214 aaKnown RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 FAM20CQ8IXL6 584 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 TBC1D3Q8IZP1 549 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 HM13Q8TCT9 377 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 MYCBPQ99417 103 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 HDAC8Q9BY41 377 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 PAIP1Q9H074 479 aaKnown RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 WDR26Q9H7D7 661 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 CARS2Q9HA77 564 aaKnown RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 SERHLQ9NQF3 203 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 CCDC177Q9NQR7 707 aaPredicted RBP17.32■□□□□ 0.36
CAPN1-201ENST00000279247 LMCD1Q9NZU5 365 aa17.32■□□□□ 0.36
CAPN1-201ENST00000279247 SPEGQ15772 3267 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 EI24O14681 340 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 LTBRP36941 435 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 PEX19P40855 299 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 HNF4AP41235 474 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 UGT2A3Q6UWM9 527 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 LRRTM4Q86VH4 590 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 MAGEE2Q8TD90 523 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-201ENST00000279247 CDCA3Q99618 268 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-201ENST00000279247 LMAN2LQ9H0V9 348 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 XKR8Q9H6D3 395 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 AGPAT4Q9NRZ5 378 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 IMP3Q9NV31 184 aaKnown RBP17.31■□□□□ 0.36
CAPN1-201ENST00000279247 GEMIN8Q9NWZ8 242 aaKnown RBP17.31■□□□□ 0.36
CAPN1-201ENST00000279247 TAC3Q9UHF0 121 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 MYO1DO94832 1006 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 NPPAP01160 153 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 ANXA6P08133 673 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 PNLIPRP1P54315 467 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 SGCGQ13326 291 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 ZNF765Q7L2R6 523 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 TMEM132CQ8N3T6 1108 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 CHCHD4Q8N4Q1 142 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 CSGALNACT1Q8TDX6 532 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 CYGBQ8WWM9 190 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 ITCHQ96J02 903 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 DPH2Q9BQC3 489 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-201ENST00000279247 RMND5AQ9H871 391 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 MAGEL2Q9UJ55 1249 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 VPS4AQ9UN37 437 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 ZFR2Q9UPR6 939 aaKnown RBP17.31■□□□□ 0.36
CAPN1-201ENST00000279247 CA5BQ9Y2D0 317 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 PCDHB3Q9Y5E6 796 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 ELOVL7A1L3X0 281 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 K7EQS6 105 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 FPGTO14772 594 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 YY2O15391 372 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 ADAM15Q13444 863 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 PON2Q15165 354 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 RUNDC3AQ59EK9 446 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 PLD3Q8IV08 490 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 RASGRP3Q8IV61 690 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 ST13P4Q8IZP2 240 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-201ENST00000279247 OR8J3Q8NGG0 315 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 ZNF514Q96K75 400 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-201ENST00000279247 RAB26Q9ULW5 256 aa17.31■□□□□ 0.36
CAPN1-201ENST00000279247 PRAMEF33A0A0G2JMD5 474 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 A0A1W2PQU0 124 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 VEGFDO43915 354 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 FUCA1P04066 466 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 GPIP06744 558 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 GNAO1P09471 354 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 MC1RQ01726 317 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 ZNF658BQ4V348 819 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-201ENST00000279247 LRRC23Q53EV4 343 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-201ENST00000279247 RD3Q7Z3Z2 195 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 ADCK2Q7Z695 626 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 ZNF548Q8NEK5 533 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-201ENST00000279247 OR4K1Q8NGD4 311 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 OR52A5Q9H2C5 316 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 EPHX3Q9H6B9 360 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 CAAP1Q9H8G2 361 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 PIPSLA2A3N6 862 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 CXCR6O00574 342 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 LDLRP01130 860 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 ZIK1Q3SY52 487 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-201ENST00000279247 KRT80Q6KB66 452 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 PROSER1Q86XN7 944 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 TMEM126BQ8IUX1 230 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 JPH3Q8WXH2 748 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-201ENST00000279247 RAB7BQ96AH8 199 aa17.3■□□□□ 0.36
CAPN1-201ENST00000279247 CENPNQ96H22 339 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-201ENST00000279247 RSPH9Q9H1X1 276 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-201ENST00000279247 ERVK-11Q9UQG0 969 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms