RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CTU2Q2VPK5 515 aaKnown RBP12.53□□□□□ -0.4
C9orf3-201ENST00000277198 CPZQ66K79 652 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 ERICH5Q6P6B1 374 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 CRTC3Q6UUV7 619 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 Q6ZNB5 142 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 CSGALNACT1Q8TDX6 532 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 SELENOMQ8WWX9 145 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 WBP2Q969T9 261 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 ZNF347Q96SE7 839 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 FUNDC2Q9BWH2 189 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 ELOVL6Q9H5J4 265 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 DUSP12Q9UNI6 340 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 PPIL1Q9Y3C6 166 aa12.53□□□□□ -0.4
C9orf3-201ENST00000277198 EVPLLA8MZ36 301 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 CFAP99D6REC4 459 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 GREM1O60565 184 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 DPM1O60762 260 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 OLFM2O95897 454 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 IGSF6O95976 241 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 PDYNP01213 254 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 SERPINA4P29622 427 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 EPHB3P54753 998 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 PHC1P78364 1004 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 PHEXP78562 749 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 MTAPQ13126 283 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 CDK5R2Q13319 367 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 PLD1Q13393 1074 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 ANKDD1AQ495B1 522 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 FAM78AQ5JUQ0 283 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 TANGO2Q6ICL3 276 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 LAIR2Q6ISS4 152 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 NEK10Q6ZWH5 1172 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 CHPFQ8IZ52 775 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 RSPRY1Q96DX4 576 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 CCDC97Q96F63 343 aaPredicted RBP12.52□□□□□ -0.4
C9orf3-201ENST00000277198 VMP1Q96GC9 406 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 METTL2AQ96IZ6 378 aaKnown RBP12.52□□□□□ -0.4
C9orf3-201ENST00000277198 FCRL1Q96LA6 429 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 CSF3RQ99062 836 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 TM6SF2Q9BZW4 377 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 TM9SF3Q9HD45 589 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 IL1RAPQ9NPH3 570 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 ARL15Q9NXU5 204 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 WARS2Q9UGM6 360 aaKnown RBP12.52□□□□□ -0.4
C9orf3-201ENST00000277198 EVLQ9UI08 416 aaPredicted RBP12.52□□□□□ -0.4
C9orf3-201ENST00000277198 RPS6KA6Q9UK32 745 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 ERGIC3Q9Y282 383 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 SH3GLB1Q9Y371 365 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 TPRKBQ9Y3C4 175 aa12.52□□□□□ -0.4
C9orf3-201ENST00000277198 MYO15AQ9UKN7 3530 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 IGLV3-16A0A075B6K0 115 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 KCNE1BA0A087WTH5 132 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 KRBA1A5PL33 1030 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 ZNF99A8MXY4 864 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-201ENST00000277198 RFXANKO14593 260 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 BCKDKO14874 412 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 SLC22A1O15245 554 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 NUAK1O60285 661 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 BCAS1O75363 584 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-201ENST00000277198 SULT1C4O75897 302 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 HIST1H2AGP0C0S8 130 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-201ENST00000277198 OCM2P0CE71 109 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 OCMP0CE72 109 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-201ENST00000277198 MPC1LP0DKB6 136 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 EPORP19235 508 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 HIST1H2ADP20671 130 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 PRPS1L1P21108 318 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 IGFBP5P24593 272 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 CA5AP35218 305 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 VIPR2P41587 438 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 SLC6A12P48065 614 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 CD97P48960 835 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 CYP4F8P98187 520 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 KCNC4Q03721 635 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 OCA2Q04671 838 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 SRSF11Q05519 484 aaKnown RBP12.52□□□□□ -0.41
C9orf3-201ENST00000277198 GBX1Q14549 363 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 CPSF6Q16630 551 aaKnown RBP eCLIP12.52□□□□□ -0.41
C9orf3-201ENST00000277198 RGS21Q2M5E4 152 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 SGO1Q5FBB7 561 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 CAPN13Q6MZZ7 669 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-201ENST00000277198 DNAJC14Q6Y2X3 702 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-201ENST00000277198 TPRG1Q6ZUI0 275 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 UBALD2Q8IYN6 164 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 PHACTR4Q8IZ21 702 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 HIST1H2AHQ96KK5 128 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 COPS8Q99627 209 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 HIST1H2AJQ99878 128 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 H2AFJQ9BTM1 129 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 DUSP21Q9H596 190 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 IL21Q9HBE4 155 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 CCNB1IP1Q9NPC3 277 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 NECTIN3Q9NQS3 549 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
C9orf3-201ENST00000277198 CA14Q9ULX7 337 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 MAFFQ9ULX9 164 aa12.52□□□□□ -0.41
C9orf3-201ENST00000277198 K7ERQ8 282 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 KPNA5O15131 536 aa12.51□□□□□ -0.41
C9orf3-201ENST00000277198 FOXD2O60548 495 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-201ENST00000277198 UGDHO60701 494 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms