RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SLC6A13Q9NSD5 602 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 GEMIN8Q9NWZ8 242 aaKnown RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 MAGEL2Q9UJ55 1249 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 RAB26Q9ULW5 256 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 PLAGL1Q9UM63 463 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TDRKHQ9Y2W6 561 aaKnown RBP9.25□□□□□ -0.93
TRIM55-201ENST00000276573 TICRRQ7Z2Z1 1910 aa9.25□□□□□ -0.93
TRIM55-201ENST00000276573 A6NHS1 94 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CCDC85CA6NKD9 419 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 SH3BGRLO75368 114 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ANXA6P08133 673 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ERGP11308 486 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 MYCLP1P12525 358 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 HOXB2P14652 356 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 HOXB9P17482 250 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 FASP25445 335 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 PTPN6P29350 595 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 OXTRP30559 389 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 HSD17B2P37059 387 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 KIR3DL1P43629 444 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 TRPC1P48995 793 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CLCNKAP51800 687 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ADPRHP54922 357 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 WNT3P56703 355 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CYP2A13Q16696 494 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 UGT8Q16880 541 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 SPIN4Q56A73 249 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 MTX3Q5HYI7 312 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 PRAMEF14Q5SWL7 426 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 PRAMEF13Q5VWM6 474 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 OR4F3Q6IEY1 312 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 TMEM154Q6P9G4 183 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CHST15Q7LFX5 561 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 HORMAD1Q86X24 394 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 TMEM132CQ8N3T6 1108 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 DTWD1Q8N5C7 304 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 C2orf73Q8N5S3 287 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 SMRP1Q8NCR6 262 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 TNIP2Q8NFZ5 429 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 OR2T12Q8NG77 320 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 OR8J2Q8NGG1 315 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 OR10A6Q8NH74 314 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 OR5K2Q8NHB8 316 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ABHD8Q96I13 439 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 NSMCE2Q96MF7 247 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 GBP5Q96PP8 586 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CPPED1Q9BRF8 314 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 HAUS8Q9BT25 410 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 APOOQ9BUR5 198 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 VCXQ9H320 206 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 GORASP2Q9H8Y8 452 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 RMI1Q9H9A7 625 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 AGPAT4Q9NRZ5 378 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 SIRT5Q9NXA8 310 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ANAPC2Q9UJX6 822 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 SCML1Q9UN30 329 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CFAP20Q9Y6A4 193 aaKnown RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 MTCH2Q9Y6C9 303 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 PIPSLA2A3N6 862 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 TXNDC9O14530 226 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 SCN2BO60939 215 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 GMNNO75496 209 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 B3GALT4O96024 378 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 GSNP06396 782 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CEACAM5P06731 702 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 LYNP07948 512 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ANXA4P09525 319 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 UBTFL6P0CB48 400 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 DRD1P21728 446 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 RPL10P27635 214 aaKnown RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 IGFALSP35858 605 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 PIK3CBP42338 1070 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CDKN2CP42773 168 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ASMTP46597 345 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 HSPA13P48723 471 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 GZMMP51124 257 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 MRPS21P82921 87 aaKnown RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 COL19A1Q14993 1142 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 PPP4R4Q6NUP7 873 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 DNAJC14Q6Y2X3 702 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ANKRD46Q86W74 232 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CALHM3Q86XJ0 350 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 TBC1D21Q8IYX1 336 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ZNF548Q8NEK5 533 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 ASB12Q8WXK4 309 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 UBE2E3Q969T4 207 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 SIPA1Q96FS4 1042 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 CCDC115Q96NT0 180 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 INSM2Q96T92 566 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 SLC29A1Q99808 456 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 MENTQ9BUN1 341 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 C1QTNF7Q9BXJ2 289 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 REXO4Q9GZR2 422 aaKnown RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 SPNS1Q9H2V7 528 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 TRIT1Q9H3H1 467 aaKnown RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 C8orf33Q9H7E9 229 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 KAT8Q9H7Z6 458 aaKnown RBP9.24□□□□□ -0.93
TRIM55-201ENST00000276573 PREBQ9HCU5 417 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 DMRT3Q9NQL9 472 aa9.24□□□□□ -0.93
TRIM55-201ENST00000276573 MAPRE3Q9UPY8 281 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms