RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 LY6G5CQ5SRR4 150 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 ARL9Q6T311 187 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 MGME1Q9BQP7 344 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 MAGEE1Q9HCI5 957 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 SRRDQ9UH36 339 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 RPL36Q9Y3U8 105 aaKnown RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 SAGE2PA6NJ88 616 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 INPPL1O15357 1258 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 LDOC1O95751 146 aaPredicted RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 AGTR2P50052 363 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 FCHO2Q0JRZ9 810 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 ENPP2Q13822 863 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 ZNF615Q8N8J6 731 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 ASB9Q96DX5 294 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 CRTAC1Q9NQ79 661 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 NID2Q14112 1375 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 UPK3BL1B0FP48 263 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 UPK3BL2E5RIL1 263 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 PMM2O15305 246 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 CYB5AP00167 134 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 PGAM2P15259 253 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 PGGT1BP53609 377 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 PUS10Q3MIT2 529 aaKnown RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 Q8N9G6 341 aaPredicted RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 TUBGCP5Q96RT8 1024 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 MAF1Q9H063 256 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 MARK1Q9P0L2 795 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 NKX1-2Q9UD57 310 aaPredicted RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 TPD52L2O43399 206 aaKnown RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 OR1I1O60431 355 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 PLGP00747 810 aaPredicted RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 GNSP15586 552 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 AP3S2P59780 193 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 TCEAL6Q6IPX3 200 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 GALNT15Q8N3T1 639 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 CMTM7Q96FZ5 175 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
USP53-201ENST00000274030 PKP2Q99959 881 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 RNF121Q9H920 327 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 ANKRA2Q9H9E1 313 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 UCKL1Q9NWZ5 548 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 DNAJB4Q9UDY4 337 aa11.16□□□□□ -0.62
USP53-201ENST00000274030 MTMR11A4FU01 709 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 SMAD9O15198 467 aaKnown RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 PTX3P26022 381 aaPredicted RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 HCAR3P49019 387 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 NRG3P56975 720 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 EEFSECP57772 596 aaKnown RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 TNFAIP8L3Q5GJ75 292 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 CWF19L1Q69YN2 538 aaKnown RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 AGTRAPQ6RW13 159 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 TPRG1Q6ZUI0 275 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 Q6ZVL8 140 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 PQLC3Q8N755 202 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 TTLQ8NG68 377 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 MOCOSQ96EN8 888 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 SGIP1Q9BQI5 828 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 TMED9Q9BVK6 235 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 GPR88Q9GZN0 384 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 ZNF224Q9NZL3 707 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 PFDN2Q9UHV9 154 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 C2orf92A0A1B0GVN3 265 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 AQP12BA6NM10 295 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 TLR4O00206 839 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 MANBAO00462 879 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 CBLP22681 906 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 DNAJA1P31689 397 aaKnown RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 CDK6Q00534 326 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 TICAM1Q8IUC6 712 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 AQP12AQ8IXF9 295 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 CELF5Q8N6W0 485 aaKnown RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 TTTY10Q9BZA0 68 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 ADAM7Q9H2U9 754 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 FARSBQ9NSD9 589 aaKnown RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 ZNF726A6NNF4 738 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 H1F0P07305 194 aaKnown RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 CCL5P13501 91 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 ACSL1P33121 698 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 MAP3K8P41279 467 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 RNF144AP50876 292 aaPredicted RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 GHRHRQ02643 423 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 SLC3A1Q07837 685 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 DNASE1L3Q13609 305 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 SPIN4Q56A73 249 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 GPRC6AQ5T6X5 926 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 ALG1LQ6GMV1 187 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 ANO7Q6IWH7 933 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 HSDL2Q6YN16 418 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 CILP2Q8IUL8 1156 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 PLD6Q8N2A8 252 aaKnown RBP11.15□□□□□ -0.62
USP53-201ENST00000274030 CCDC54Q8NEL0 328 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 BPIFB1Q8TDL5 484 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 RAB2BQ8WUD1 216 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 STON2Q8WXE9 905 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 NCSTNQ92542 709 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 TTYH2Q9BSA4 534 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 RBCK1Q9BYM8 510 aa11.15□□□□□ -0.62
USP53-201ENST00000274030 ABI3Q9P2A4 366 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms