RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SPO11Q9Y5K1 396 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 BCKDKO14874 412 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 TTKP33981 857 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 HERC3Q15034 1050 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 ZDHHC14Q8IZN3 488 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 PHTF2Q8N3S3 785 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 ARMC5Q96C12 935 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 OLFM1Q99784 485 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 ETAA1Q9NY74 926 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 SCN9AQ15858 1988 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 TYROBPO43914 113 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 CCNB2O95067 398 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 IVDP26440 423 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 RPS9P46781 194 aaKnown RBP13.32□□□□□ -0.28
NPC1-201ENST00000269228 DSTNP60981 165 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 XIAPP98170 497 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 OC90Q02509 493 aaPredicted RBP13.32□□□□□ -0.28
NPC1-201ENST00000269228 TECRLQ5HYJ1 363 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 NEK5Q6P3R8 708 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 SCML4Q8N228 414 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 SEC14L1Q92503 715 aa13.32□□□□□ -0.28
NPC1-201ENST00000269228 NPC1O15118 1278 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 KLK3P07288 261 aaPredicted RBP13.31□□□□□ -0.28
NPC1-201ENST00000269228 GMPRP36959 345 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 NR1H2P55055 460 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 DNAJB13P59910 316 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 KRR1Q13601 381 aaKnown RBP13.31□□□□□ -0.28
NPC1-201ENST00000269228 ZNF234Q14588 700 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 FBXO43Q4G163 708 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 SPANXN4Q5MJ08 99 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 RTP4Q96DX8 246 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 BOCQ9BWV1 1114 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 CCNB1IP1Q9NPC3 277 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 SMPD3Q9NY59 655 aaPredicted RBP13.31□□□□□ -0.28
NPC1-201ENST00000269228 APOBEC3BQ9UH17 382 aaKnown RBP13.31□□□□□ -0.28
NPC1-201ENST00000269228 SERTAD3Q9UJW9 196 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 DLGAP4Q9Y2H0 992 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 GADD45GO95257 159 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 SEMA4FO95754 770 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 FGF3P11487 239 aaPredicted RBP13.31□□□□□ -0.28
NPC1-201ENST00000269228 SUOXP51687 545 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 RSBN1Q5VWQ0 802 aaPredicted RBP13.31□□□□□ -0.28
NPC1-201ENST00000269228 OXR1Q8N573 874 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 CDADC1Q9BWV3 514 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 PHF11Q9UIL8 331 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 PRORSD1PA6NEY8 169 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 GLOD5A6NK44 160 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 OPN1SWP03999 348 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 MPC1LP0DKB6 136 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 ALOX12P18054 663 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 CLCN4P51793 760 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 COX10Q12887 443 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 CDHR3Q6ZTQ4 885 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 PNPLA1Q8N8W4 532 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 MOSPD2Q8NHP6 518 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 TMEM174Q8WUU8 243 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 ZNF317Q96PQ6 595 aaPredicted RBP13.31□□□□□ -0.28
NPC1-201ENST00000269228 MARCH5Q9NX47 278 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 DRGXA6NNA5 263 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 RFXAPO00287 272 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 MATN2O00339 956 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 DBTP11182 482 aaKnown RBP13.31□□□□□ -0.28
NPC1-201ENST00000269228 PCDH1Q08174 1060 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 C6orf52Q5T4I8 152 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 NATD1Q8N6N6 113 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 SMPDL3BQ92485 455 aa13.31□□□□□ -0.28
NPC1-201ENST00000269228 DNMT3BQ9UBC3 853 aaKnown RBP13.31□□□□□ -0.28
NPC1-201ENST00000269228 OR6C74A6NCV1 312 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 ZNF860A6NHJ4 632 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 PGRP06401 933 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 CLCN7P51798 805 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 RTN4RL1Q86UN2 441 aaPredicted RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 MOCOSQ96EN8 888 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 ELL3Q9HB65 397 aaPredicted RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 IKZF2Q9UKS7 526 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 GPR34Q9UPC5 381 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 PHIPQ8WWQ0 1821 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 NPIPB15A6NHN6 443 aaPredicted RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 CENPXA8MT69 81 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 C2orf74A8MZ97 194 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 NRG3P56975 720 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 SLC7A9P82251 487 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 EMX2Q04743 252 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 MGAT3Q09327 533 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 GANABQ14697 944 aaKnown RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 C16orf72Q14CZ0 275 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 DUOXA1Q1HG43 343 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 TCEAL5Q5H9L2 206 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 STEAP4Q687X5 459 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 ANKRD26P1Q6NSI1 321 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 TMEM173Q86WV6 379 aaPredicted RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 TBL1XR1Q9BZK7 514 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 LMAN1LQ9HAT1 526 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 OARD1Q9Y530 152 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 MYH7BA7E2Y1 1941 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 PNMA8CA0A1B0GUJ8 204 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 KPNA4O00629 521 aaPredicted RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 CD72P21854 359 aa13.3□□□□□ -0.28
NPC1-201ENST00000269228 EEFSECP57772 596 aaKnown RBP13.3□□□□□ -0.28
NPC1-201ENST00000269228 ID2Q02363 134 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms