RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 KDM1AO60341 852 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 ZNF217O75362 1048 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 EPN2O95208 641 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 C1GALT1C1LP0DN25 315 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 SPEM2Q0P670 501 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 ZNF423Q2M1K9 1284 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 VPS26BQ4G0F5 336 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 SGO1Q5FBB7 561 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 PRAMEF14Q5SWL7 426 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 PRAMEF13Q5VWM6 474 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 PMS2CLQ68D20 193 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 GCNT7Q6ZNI0 430 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 ABI3BPQ7Z7G0 1075 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 RETREG3Q86VR2 466 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 DPP10Q8N608 796 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 FRMD1Q8N878 549 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 FAM174AQ8TBP5 190 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 SMPDL3AQ92484 453 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 TEX37Q96LM6 180 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 ZBTB18Q99592 522 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 PITHD1Q9GZP4 211 aaPredicted RBP14.82□□□□□ -0.04
COPS3-201ENST00000268717 MAP10Q9P2G4 905 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 PSMD13Q9UNM6 376 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 POMPQ9Y244 141 aa14.82□□□□□ -0.04
COPS3-201ENST00000268717 CCDC154A6NI56 674 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 PRAMEF26H0Y7S4 382 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 FOXE1O00358 373 aaPredicted RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 TRIM38O00635 465 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 CFLARO15519 480 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 FKBP6O75344 327 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 ME2P23368 584 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 VARSP26640 1264 aaKnown RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 RABIFP47224 123 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 CLNS1AP54105 237 aaKnown RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 NME5P56597 212 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 HIST2H2ACQ16777 129 aaPredicted RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 KIAA0895LQ68EN5 471 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 HIST2H2AA3Q6FI13 130 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 MED27Q6P2C8 311 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 AAGABQ6PD74 315 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 NXPE4Q6UWF7 544 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 TMPRSS11BQ86T26 416 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 HPS6Q86YV9 775 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 OR7G3Q8NG95 312 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 C12orf66Q96MD2 445 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 INSM2Q96T92 566 aaPredicted RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 CARS2Q9HA77 564 aaKnown RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 PELI2Q9HAT8 420 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 WSB2Q9NYS7 404 aaPredicted RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 TMEM181Q9P2C4 612 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 ABCD2Q9UBJ2 740 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 VPS29Q9UBQ0 182 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 SUCOQ9UBS9 1254 aaKnown RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 PCOLCE2Q9UKZ9 415 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 GPSM3Q9Y4H4 160 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 LAMA1P25391 3075 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 PRMT3O60678 531 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 PDE5AO76074 875 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 PSMG1O95456 288 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 IGHV4-34P06331 123 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 BCKDHAP12694 445 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 AMD1P17707 334 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 NDUFS1P28331 727 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 IL12AP29459 219 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 DPP6P42658 865 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 THOP1P52888 689 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 CLDN2P57739 230 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 TLR1Q15399 786 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 SAMD4BQ5PRF9 694 aaKnown RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 LIX1Q8N485 282 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 OR1E3Q8WZA6 343 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 C11orf24Q96F05 449 aaPredicted RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 MYOCQ99972 504 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 ARRDC1-AS1Q9H2J1 176 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 OSGEPL1Q9H4B0 414 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 SEMA4GQ9NTN9 838 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 NMRK1Q9NWW6 199 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 TRNAU1APQ9NX07 287 aaKnown RBP14.81□□□□□ -0.04
COPS3-201ENST00000268717 SIRT5Q9NXA8 310 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 CIDEBQ9UHD4 219 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 KCNK6Q9Y257 313 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 WDR37Q9Y2I8 494 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 PCDHGA5Q9Y5G8 931 aa14.81□□□□□ -0.04
COPS3-201ENST00000268717 C15orf38-AP3S2A0A0A6YYH1 394 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 FXYD1O00168 92 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 IL6P05231 212 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 RPL10P27635 214 aaKnown RBP14.8□□□□□ -0.04
COPS3-201ENST00000268717 CD6P30203 668 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 SERPINB1P30740 379 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 PIK3CBP42338 1070 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 RAB28P51157 221 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 NEK2P51955 445 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 CLDN8P56748 225 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 C21orf58P58505 322 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 PHEXP78562 749 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 CEACAM7Q14002 265 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 ENPP7Q6UWV6 458 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 ABRAXAS1Q6UWZ7 409 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 ARPINQ7Z6K5 226 aa14.8□□□□□ -0.04
COPS3-201ENST00000268717 DNAJB8Q8NHS0 232 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms