RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 HTR1EP28566 365 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 OR1E2P47887 323 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 ATP4BP51164 291 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 PCDH1Q08174 1060 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 CHRNA6Q15825 494 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 PKDCCQ504Y2 493 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 PAGE3Q5JUK9 113 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 PM20D1Q6GTS8 502 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 ANKRD26P1Q6NSI1 321 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF730Q6ZMV8 503 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 GOLGA7Q7Z5G4 137 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 DSG4Q86SJ6 1040 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 TIGD4Q8IY51 512 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 SLC38A4Q969I6 547 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 TIFAQ96CG3 184 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 SH3YL1Q96HL8 342 aaPredicted RBP11.24□□□□□ -0.61
VPS33A-201ENST00000267199 CXCL16Q9H2A7 254 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 CCDC177Q9NQR7 707 aaPredicted RBP11.24□□□□□ -0.61
VPS33A-201ENST00000267199 DNAJC27Q9NZQ0 273 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 GULP1Q9UBP9 304 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 SPACA6W5XKT8 324 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 TNRC6CQ9HCJ0 1690 aaKnown RBP11.24□□□□□ -0.61
VPS33A-201ENST00000267199 HPGDP15428 266 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 KCNA5P22460 613 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 RPS3P23396 243 aaKnown RBP eCLIP11.24□□□□□ -0.61
VPS33A-201ENST00000267199 PPP5CP53041 499 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 FAM189BP81408 668 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 TGM3Q08188 693 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 HSPB3Q12988 150 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 CRHR2Q13324 411 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 UGT8Q16880 541 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 BTBD16Q32M84 506 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 UAP1L1Q3KQV9 507 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 SERPINA13PQ6UXR4 307 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 RNF44Q7L0R7 432 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 RAD51AP1Q96B01 352 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 C1orf74Q96LT6 269 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 ASPNQ9BXN1 380 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 RIMKLBQ9ULI2 386 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 RNF11Q9Y3C5 154 aa11.24□□□□□ -0.61
VPS33A-201ENST00000267199 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SLC35F4A4IF30 521 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 UPK3BL1B0FP48 263 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 UPK3BL2E5RIL1 263 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 MTX2O75431 263 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SLITRK5O94991 958 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 PRLP01236 227 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 FYNP06241 537 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 CKMT1AP12532 417 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 HSD17B1P14061 328 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 CD72P21854 359 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SNRPD2P62316 118 aaKnown RBP11.23□□□□□ -0.61
VPS33A-201ENST00000267199 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
VPS33A-201ENST00000267199 HSF2Q03933 536 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SRSF11Q05519 484 aaKnown RBP11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ABHD18Q0P651 414 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ISCA2Q86U28 154 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ADGRG5Q8IZF4 528 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ZMIZ2Q8NF64 920 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF675Q8TD23 568 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 TBX5Q99593 518 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 OLAHQ9NV23 265 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ARMC1Q9NVT9 282 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 PCDH10Q9P2E7 1040 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 PFDN2Q9UHV9 154 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SLC45A1Q9Y2W3 748 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 HAS3O00219 553 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 STX16O14662 325 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 GRM6O15303 877 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 APOL3O95236 402 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 CLDN7O95471 211 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 STSP08842 583 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 CXCR2P25025 360 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 CCR4P51679 360 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 FOXA1P55317 472 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 EMX2Q04743 252 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 FPGSQ05932 587 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 RAPSNQ13702 412 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SLC9A5Q14940 896 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 KCNJ8Q15842 424 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ATP13A5Q4VNC0 1218 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 LRRTM3Q86VH5 581 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 AMIGO1Q86WK6 493 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 CCDC28AQ8IWP9 274 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SLC37A3Q8NCC5 494 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 OR52B6Q8NGF0 335 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 OLIG1Q8TAK6 271 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 AP2M1Q96CW1 435 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 MRPL48Q96GC5 212 aaKnown RBP11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SLC30A3Q99726 388 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 MPZL2O60487 215 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ADH1AP07327 375 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 C7P10643 843 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 MATN1P21941 496 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 ZNF45Q02386 682 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 RPL6Q02878 288 aaKnown RBP11.23□□□□□ -0.61
VPS33A-201ENST00000267199 SGCGQ13326 291 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 TEAD4Q15561 434 aa11.23□□□□□ -0.61
VPS33A-201ENST00000267199 CLEC12AQ5QGZ9 265 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms