RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PSIP1O75475 530 aaKnown RBP12.48□□□□□ -0.41
CPSF6-201ENST00000266679 SLCO2B1O94956 709 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 ATE1O95260 518 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 PTPN2P17706 415 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 PRPS1L1P21108 318 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 DDX6P26196 483 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPSF6-201ENST00000266679 KCNAB2Q13303 367 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 LIPJQ5W064 366 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 ADNP2Q6IQ32 1131 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 ZCCHC8Q6NZY4 707 aaKnown RBP12.48□□□□□ -0.41
CPSF6-201ENST00000266679 AGTRAPQ6RW13 159 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 MSANTD1Q6ZTZ1 278 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 RASGRP3Q8IV61 690 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 CLECL1Q8IZS7 167 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 PJA1Q8NG27 643 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 PNPT1Q8TCS8 783 aaKnown RBP12.48□□□□□ -0.41
CPSF6-201ENST00000266679 ING5Q8WYH8 240 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 HLA-CQ95604 372 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 TMEM159Q96B96 161 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 FCRL1Q96LA6 429 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 MAGEB10Q96LZ2 347 aaPredicted RBP12.48□□□□□ -0.41
CPSF6-201ENST00000266679 ZSWIM3Q96MP5 696 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 COG8Q96MW5 612 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 PANX1Q96RD7 426 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 ZSCAN5AQ9BUG6 496 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 EXD2Q9NVH0 621 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 VPS29Q9UBQ0 182 aa12.48□□□□□ -0.41
CPSF6-201ENST00000266679 TSPAN11A1L157 253 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 SERTM1A2A2V5 107 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 EVPLLA8MZ36 301 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 NPIPB8E9PQR5 432 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ACPPP15309 386 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ENGP17813 658 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 DCKP27707 260 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 NNMTP40261 264 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 WNT3P56703 355 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 MTAPQ13126 283 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ACOX1Q15067 660 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 MEP1AQ16819 746 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 CTU2Q2VPK5 515 aaKnown RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 BROXQ5VW32 411 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF621Q6ZSS3 439 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 FKBP9P1Q75LS8 142 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 DPPA4Q7L190 304 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 R3HCC1LQ7Z5L2 792 aaKnown RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ZDHHC21Q8IVQ6 265 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 WDR20Q8TBZ3 569 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 BTN2A2Q8WVV5 523 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 CLP1Q92989 425 aaKnown RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 HHIPQ96QV1 700 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 WRAP53Q9BUR4 548 aaKnown RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 SGK2Q9HBY8 427 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ETAA1Q9NY74 926 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 PCDHGA8Q9Y5G5 932 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 LRRK1Q38SD2 2015 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 NUP214P35658 2090 aaPredicted RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF701M0R085 212 aaPredicted RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 CLIC1O00299 241 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ATG13O75143 517 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 EPN2O95208 641 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 CPNE6O95741 557 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 CATP04040 527 aaKnown RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ELFN1P0C7U0 828 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 EPHA5P54756 1037 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 NUP107P57740 925 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ACSM2AQ08AH3 577 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 EPS8Q12929 822 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 GTF2H3Q13889 308 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 KCNC3Q14003 757 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 LAPTM4AQ15012 233 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF805Q5CZA5 627 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 RBM48Q5RL73 367 aaKnown RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 LDLRAP1Q5SW96 308 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ACSM2BQ68CK6 577 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ZZZ3Q8IYH5 903 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF557Q8N988 423 aaPredicted RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 CHDHQ8NE62 594 aaPredicted RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 GLMNQ92990 594 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 GLYATL1Q969I3 302 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 OR4K3Q96R72 315 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 PKP4Q99569 1192 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 DPH2Q9BQC3 489 aaPredicted RBP12.47□□□□□ -0.41
CPSF6-201ENST00000266679 ABCG2Q9UNQ0 655 aa12.47□□□□□ -0.41
CPSF6-201ENST00000266679 TNFRSF10AO00220 468 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 UGDHO60701 494 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 NOL3O60936 208 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 ETHE1O95571 254 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 FGF19O95750 216 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 CRHBPP24387 322 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 TTKP33981 857 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 MMP12P39900 470 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 STT3AP46977 705 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 TRPC1P48995 793 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 SRSF11Q05519 484 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 DCTN2Q13561 401 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 MYBPC3Q14896 1274 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 GRHL2Q6ISB3 625 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 TMEM220Q6QAJ8 160 aa12.46□□□□□ -0.41
CPSF6-201ENST00000266679 PARS2Q7L3T8 475 aaKnown RBP12.46□□□□□ -0.41
CPSF6-201ENST00000266679 TECPR1Q7Z6L1 1165 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms