RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 E7ENX8 843 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 PGRMC1O00264 195 aaKnown RBP9.27□□□□□ -0.93
VPS41-201ENST00000265745 PHF2O75151 1096 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 ALOX12BO75342 701 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 HAUS5O94927 633 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 ENO3P13929 434 aaPredicted RBP9.27□□□□□ -0.93
VPS41-201ENST00000265745 ITGA3P26006 1051 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 RPA3P35244 121 aaPredicted RBP9.27□□□□□ -0.93
VPS41-201ENST00000265745 SLC1A2P43004 574 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 FNTAP49354 379 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 TAP2Q03519 686 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 RELAQ04206 551 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 OCA2Q04671 838 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 KLC1Q07866 573 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 CUL1Q13616 776 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 MUM1Q2TAK8 710 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 EIF2S3LQ2VIR3 472 aaKnown RBP9.27□□□□□ -0.93
VPS41-201ENST00000265745 ATG9BQ674R7 924 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 ZNF425Q6IV72 752 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 IGFL2Q6UWQ7 119 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 PAQR7Q86WK9 346 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 LMNTD2Q8IXW0 634 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 CCDC116Q8IYX3 515 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 IQCKQ8N0W5 287 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 ZADH2Q8N4Q0 377 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 ARHGEF39Q8N4T4 335 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 CISD2Q8N5K1 135 aaKnown RBP9.27□□□□□ -0.93
VPS41-201ENST00000265745 STT3BQ8TCJ2 826 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 CD200R1Q8TD46 325 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 CALML6Q8TD86 181 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 ACTRT1Q8TDG2 376 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 ZNF480Q8WV37 535 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 TM9SF4Q92544 642 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 INPP5DQ92835 1189 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 C10orf90Q96M02 699 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 OR2A5Q96R48 311 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 BARD1Q99728 777 aaKnown RBP9.27□□□□□ -0.93
VPS41-201ENST00000265745 MESP1Q9BRJ9 268 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 CCDC68Q9H2F9 335 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 C20orf96Q9NUD7 363 aaPredicted RBP9.27□□□□□ -0.93
VPS41-201ENST00000265745 ZNF282Q9UDV7 671 aaPredicted RBP9.27□□□□□ -0.93
VPS41-201ENST00000265745 TAC3Q9UHF0 121 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 FBXO5Q9UKT4 447 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 MAD1L1Q9Y6D9 718 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 PCSK5Q92824 1860 aa9.27□□□□□ -0.93
VPS41-201ENST00000265745 NOTCH2Q04721 2471 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 SPTAN1Q13813 2472 aaKnown RBP9.26□□□□□ -0.93
VPS41-201ENST00000265745 A6NJY4 79 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 ZBTB14O43829 449 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 SEMA7AO75326 666 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 VPS26AO75436 327 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 AGFG2O95081 481 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 CBX6O95503 412 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 ZGLP1P0C6A0 271 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 MPC1LP0DKB6 136 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 ERVK-10P10266 1014 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 VAMP1P23763 118 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 SKIV2L2P42285 1042 aaKnown RBP9.26□□□□□ -0.93
VPS41-201ENST00000265745 CARSP49589 748 aaKnown RBP9.26□□□□□ -0.93
VPS41-201ENST00000265745 ABATP80404 500 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 TIAL1Q01085 375 aaKnown RBP eCLIP9.26□□□□□ -0.93
VPS41-201ENST00000265745 Q0VFX4 171 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 MRPL49Q13405 166 aaKnown RBP9.26□□□□□ -0.93
VPS41-201ENST00000265745 TSTA3Q13630 321 aaPredicted RBP9.26□□□□□ -0.93
VPS41-201ENST00000265745 RBBP7Q16576 425 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 HSP90AA5PQ58FG0 334 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 VWA2Q5GFL6 755 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 RNASEH2BQ5TBB1 312 aaKnown RBP9.26□□□□□ -0.93
VPS41-201ENST00000265745 AGAP7PQ5VUJ5 663 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 ICE2Q659A1 982 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 CUZD1Q86UP6 607 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 PPIL6Q8IXY8 311 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 LRRC56Q8IYG6 542 aaPredicted RBP9.26□□□□□ -0.93
VPS41-201ENST00000265745 CSNK1A1LQ8N752 337 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 PPFIBP2Q8ND30 876 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 GRK7Q8WTQ7 553 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 MIEF2Q96C03 454 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 VPS50Q96JG6 964 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 CABS1Q96KC9 395 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 AGAP4Q96P64 663 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 OSBPL9Q96SU4 736 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 GPR21Q99679 349 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 AARSD1Q9BTE6 412 aaKnown RBP9.26□□□□□ -0.93
VPS41-201ENST00000265745 CRB3Q9BUF7 120 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 RBCK1Q9BYM8 510 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 LRRC4CQ9HCJ2 640 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 ASF1BQ9NVP2 202 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 UTP6Q9NYH9 597 aaKnown RBP9.26□□□□□ -0.93
VPS41-201ENST00000265745 C3orf18Q9UK00 162 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 CDC14AQ9UNH5 594 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 COMMD10Q9Y6G5 202 aa9.26□□□□□ -0.93
VPS41-201ENST00000265745 PIKFYVEQ9Y2I7 2098 aa9.25□□□□□ -0.93
VPS41-201ENST00000265745 GOLGA6L10A0A0M3HER8 536 aa9.25□□□□□ -0.93
VPS41-201ENST00000265745 EIF3FO00303 357 aaPredicted RBP9.25□□□□□ -0.93
VPS41-201ENST00000265745 CES2O00748 559 aa9.25□□□□□ -0.93
VPS41-201ENST00000265745 SIAH2O43255 324 aa9.25□□□□□ -0.93
VPS41-201ENST00000265745 CCNDBP1O95273 360 aa9.25□□□□□ -0.93
VPS41-201ENST00000265745 SYF2O95926 243 aaKnown RBP9.25□□□□□ -0.93
VPS41-201ENST00000265745 EZRP15311 586 aaKnown RBP9.25□□□□□ -0.93
VPS41-201ENST00000265745 GABRB3P28472 473 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms