RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 EIF1AYO14602 144 aaKnown RBP17.54■□□□□ 0.4
COL5A3-201ENST00000264828 CREB5Q02930 508 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 ADAM15Q13444 863 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 LRRC69Q6ZNQ3 347 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 TMED4Q7Z7H5 227 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 AQP11Q8NBQ7 271 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 SEC14L1Q92503 715 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 CYTH4Q9UIA0 394 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 TRBC2A0A5B9 178 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 HAS3O00219 553 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 PRKACGP22612 351 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 OLIG2Q13516 323 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 TMPRSS9Q7Z410 1059 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF101Q8IZC7 436 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 TMEM74Q96NL1 305 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 CGREF1Q99674 301 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 BEX2Q9BXY8 128 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 TTTY10Q9BZA0 68 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 BEX1Q9HBH7 125 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 HCN3Q9P1Z3 774 aa17.54■□□□□ 0.4
COL5A3-201ENST00000264828 FARSAQ9Y285 508 aaKnown RBP17.54■□□□□ 0.4
COL5A3-201ENST00000264828 XPNPEP2O43895 674 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 ENTPD6O75354 484 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 YES1P07947 543 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 TACSTD2P09758 323 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 GGT5P36269 586 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 RBM34P42696 430 aaKnown RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 SOWAHAQ2M3V2 549 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 MBOAT1Q6ZNC8 495 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 AMZ2Q86W34 360 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 OR2L2Q8NH16 312 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 MIPEPQ99797 713 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 HERC2P3Q9BVR0 1158 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 KHNYNO15037 678 aaKnown RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 PI15O43692 258 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 GDI2P50395 445 aaKnown RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 HYAL2Q12891 473 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 AMZ1Q400G9 498 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 ARSIQ5FYB1 569 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 SPIN3Q5JUX0 258 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 C1orf52Q8N6N3 182 aaKnown RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 DNAJB8Q8NHS0 232 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 GEMIN6Q8WXD5 167 aaKnown RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 PARPBPQ9NWS1 579 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 NDUFS4O43181 175 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 NARSO43776 548 aaKnown RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 PRPS1L1P21108 318 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 LBX2Q6XYB7 198 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 SPATA7Q9P0W8 599 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 GNG8Q9UK08 70 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 CMAHPQ9Y471 501 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 SOWAHBA6NEL2 793 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 SYN3O14994 580 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 H1F0P07305 194 aaKnown RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 CXCR1P25024 350 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 CDKN1CP49918 316 aaPredicted RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 DPYSL2Q16555 572 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 PUS10Q3MIT2 529 aaKnown RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 OR2T5Q6IEZ7 315 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 MTMR14Q8NCE2 650 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 OR2T29Q8NH02 315 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF431Q8TF32 576 aaPredicted RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 KLHL6Q8WZ60 621 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 C12orf43Q96C57 262 aaKnown RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 SLC7A6OSQ96CW6 309 aaPredicted RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 PLEKHA6Q9Y2H5 1048 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 OAZ2O95190 189 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 CFHP08603 1231 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 SRCP12931 536 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 SLC10A6Q3KNW5 377 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 SLAIN1Q8ND83 568 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 FUZQ9BT04 418 aa17.53■□□□□ 0.4
COL5A3-201ENST00000264828 FBXO9Q9UK97 447 aaPredicted RBP17.53■□□□□ 0.4
COL5A3-201ENST00000264828 VNN2O95498 520 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 ACP5P13686 325 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 SP2Q02086 613 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 MPP2Q14168 576 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 UGT8Q16880 541 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 DPY19L1Q2PZI1 675 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 ANKDD1AQ495B1 522 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 GXYLT1Q4G148 440 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 JAGN1Q8N5M9 183 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 ZNF700Q9H0M5 742 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 FETUBQ9UGM5 382 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 HSDL2Q6YN16 418 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 PHC2Q8IXK0 858 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 C9orf43Q8TAL5 461 aaPredicted RBP17.52■□□□□ 0.4
COL5A3-201ENST00000264828 SYT17Q9BSW7 474 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 APLP1P51693 650 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 DUOXA1Q1HG43 343 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 NUDT13Q86X67 352 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 RIOK2Q9BVS4 552 aaKnown RBP17.52■□□□□ 0.4
COL5A3-201ENST00000264828 RHCGQ9UBD6 479 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 FBXL3Q9UKT7 428 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 SLC22A14Q9Y267 594 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 HEBP2Q9Y5Z4 205 aa17.52■□□□□ 0.4
COL5A3-201ENST00000264828 JUNP05412 331 aaKnown RBP17.52■□□□□ 0.39
COL5A3-201ENST00000264828 VAMP1P23763 118 aa17.52■□□□□ 0.39
COL5A3-201ENST00000264828 HADHBP55084 474 aaKnown RBP17.52■□□□□ 0.39
COL5A3-201ENST00000264828 MLLT10P55197 1068 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms