RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 PTGDR2Q9Y5Y4 395 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 MYH9P35579 1960 aaKnown RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 PSMD11O00231 422 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 GRID2O43424 1007 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 TNFAIP8L3Q5GJ75 292 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 ZNF776Q68DI1 518 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 COMMD2Q86X83 199 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 LGI4Q8N135 537 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 LINC01465Q8N7H1 131 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 POLR2J3Q9H1A7 115 aaKnown RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 POLMQ9NP87 494 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-201ENST00000264555 IL1RAPQ9NPH3 570 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 ELOVL2Q9NXB9 296 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 A0A0G2JN53 185 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 FMO3P31513 532 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 TARDBPQ13148 414 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■■■□ 21.6
PHRF1-201ENST00000264555 ATG9BQ674R7 924 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 NOXRED1Q6NXP6 359 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 ENPP7Q6UWV6 458 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 RTL4Q6ZR62 310 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 SLC15A3Q8IY34 581 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 ZNF248Q8NDW4 579 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 FIBINQ8TAL6 211 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 SORT1Q99523 831 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 CHCHD6Q9BRQ6 235 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 TREX1Q9NSU2 369 aa16.25■□□□□ 0.19
PHRF1-201ENST00000264555 LOC100130705A0A1B0GUX0 176 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 HLA-EP13747 358 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 PTGR1Q14914 329 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 ZNF789Q5FWF6 425 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 OR51B5Q9H339 312 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 ALPPP05187 535 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 TAS2R50P59544 299 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 GANABQ14697 944 aaKnown RBP16.24■□□□□ 0.19
PHRF1-201ENST00000264555 MAPK15Q8TD08 544 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 SLC2A11Q9BYW1 496 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 RPF2Q9H7B2 306 aaKnown RBP16.24■□□□□ 0.19
PHRF1-201ENST00000264555 ARNT2Q9HBZ2 717 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 SAGE2PA6NJ88 616 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 C9P02748 559 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 IL7RP16871 459 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 TM4SF4P48230 202 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 CDH15P55291 814 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 ZNF630Q2M218 657 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-201ENST00000264555 COL21A1Q96P44 957 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 NEUROD4Q9HD90 331 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 POFUT2Q9Y2G5 429 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 MRPS7Q9Y2R9 242 aaKnown RBP16.24■□□□□ 0.19
PHRF1-201ENST00000264555 PCDHB3Q9Y5E6 796 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 CFAP20Q9Y6A4 193 aaKnown RBP16.24■□□□□ 0.19
PHRF1-201ENST00000264555 C8BP07358 591 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 NPTX1Q15818 432 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 ATP6AP1Q15904 470 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 ZNF423Q2M1K9 1284 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 ZNF311Q5JNZ3 666 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.24■□□□□ 0.19
PHRF1-201ENST00000264555 GOLM1Q8NBJ4 401 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 ZNF563Q8TA94 476 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 SIPA1Q96FS4 1042 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 HSH2DQ96JZ2 352 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 TPK1Q9H3S4 243 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 PCTPQ9UKL6 214 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 EMCNQ9ULC0 261 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 TMEM98Q9Y2Y6 226 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 SPO11Q9Y5K1 396 aa16.24■□□□□ 0.19
PHRF1-201ENST00000264555 A0A096LPI6 279 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 CLDN25C9JDP6 229 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 ERI3O43414 337 aaKnown RBP16.23■□□□□ 0.19
PHRF1-201ENST00000264555 TSPAN6O43657 245 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 TPST2O60704 377 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 PDYNP01213 254 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 ZNF763Q0D2J5 394 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 ABRAXAS2Q15018 415 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 EIPR1Q53HC9 387 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 TCEAL8Q8IYN2 117 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 STON2Q8WXE9 905 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 FCRL4Q96PJ5 515 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 TM9SF3Q9HD45 589 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 FBXL12Q9NXK8 326 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 OPN1SWP03999 348 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 BLKP51451 505 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 QPRTQ15274 297 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 IQCCQ4KMZ1 466 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 CNTN4Q8IWV2 1026 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 CASD1Q96PB1 797 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 MAN2B2Q9Y2E5 1009 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 M0QX08 132 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 SLC30A4O14863 429 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 BPIP17213 487 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 ITPKBP27987 946 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 IL18R1Q13478 541 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 NDUFAF6Q330K2 333 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 PIGGQ5H8A4 983 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 C11orf88Q6PI97 169 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 RSPH9Q9H1X1 276 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-201ENST00000264555 TRBC2A0A5B9 178 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 TSC22D2O75157 780 aa16.23■□□□□ 0.19
PHRF1-201ENST00000264555 RPLP0P05388 317 aaKnown RBP16.23■□□□□ 0.19
PHRF1-201ENST00000264555 RPL10P27635 214 aaKnown RBP16.23■□□□□ 0.19
PHRF1-201ENST00000264555 LAPTM4BQ86VI4 370 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms