RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 AURKBQ96GD4 344 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1-201ENST00000262554 EFCAB11Q9BUY7 163 aa12.5□□□□□ -0.41
SPTLC1-201ENST00000262554 ADI1Q9BV57 179 aa12.5□□□□□ -0.41
SPTLC1-201ENST00000262554 SGPP1Q9BX95 441 aa12.5□□□□□ -0.41
SPTLC1-201ENST00000262554 REXO4Q9GZR2 422 aaKnown RBP12.5□□□□□ -0.41
SPTLC1-201ENST00000262554 MCOLN1Q9GZU1 580 aa12.5□□□□□ -0.41
SPTLC1-201ENST00000262554 ZDHHC4Q9NPG8 344 aa12.5□□□□□ -0.41
SPTLC1-201ENST00000262554 FAM120CQ9NX05 1096 aaKnown RBP12.5□□□□□ -0.41
SPTLC1-201ENST00000262554 ZNF639Q9UID6 485 aa12.5□□□□□ -0.41
SPTLC1-201ENST00000262554 PCM1Q15154 2024 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 EVPLLA8MZ36 301 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 DLGAP1O14490 977 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 H6PDO95479 791 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 NPPBP16860 134 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 HOXB6P17509 224 aaKnown RBP12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 ACADLP28330 430 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 CDKN2CP42773 168 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 RPS9P46781 194 aaKnown RBP12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 ADRM1Q16186 407 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 HIST2H2ACQ16777 129 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 UGT8Q16880 541 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 PIP5KL1Q5T9C9 394 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 HIST2H2AA3Q6FI13 130 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 XKR5Q6UX68 686 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 FKBP9P1Q75LS8 142 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 C1orf52Q8N6N3 182 aaKnown RBP12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 PLA2G15Q8NCC3 412 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 OR8J2Q8NGG1 315 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 CDC26Q8NHZ8 85 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 WDR34Q96EX3 536 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 C11orf24Q96F05 449 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 SLC47A1Q96FL8 570 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 COX14Q96I36 57 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 REXO5Q96IC2 774 aaKnown RBP12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 PANX1Q96RD7 426 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 EHD1Q9H4M9 534 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 SMPD3Q9NY59 655 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 HCN2Q9UL51 889 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 MYRFQ9Y2G1 1151 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 TMEM98Q9Y2Y6 226 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 STON1Q9Y6Q2 735 aa12.49□□□□□ -0.41
SPTLC1-201ENST00000262554 CREG1O75629 220 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 B3GALT4O96024 378 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 PCCBP05166 539 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 ANXA4P09525 319 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 C1GALT1C1LP0DN25 315 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 ATP6V1B1P15313 513 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 GZMMP51124 257 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 RPA4Q13156 261 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 PPP2R2DQ66LE6 453 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 DOK6Q6PKX4 331 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 ENPP6Q6UWR7 440 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 C11orf96Q7Z7L8 435 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 SATL1Q86VE3 508 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 AMZ2Q86W34 360 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 HEATR4Q86WZ0 1026 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 MAGEE2Q8TD90 523 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 CHTF18Q8WVB6 975 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 RMND5BQ96G75 393 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 HAUS8Q9BT25 410 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 PLA2G2FQ9BZM2 168 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 ZDHHC5Q9C0B5 715 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 EPB41L1Q9H4G0 881 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 CD320Q9NPF0 282 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 CCDC177Q9NQR7 707 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 DCAF13Q9NV06 445 aaKnown RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 SUFUQ9UMX1 484 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 DOCK8Q8NF50 2099 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 EME2A4GXA9 379 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 IGLON5A6NGN9 336 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 H3BNH8 94 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 FOXE1O00358 373 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 PLOD2O00469 737 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 SCAMP2O15127 329 aaKnown RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 PRSS23O95084 383 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 PCDH8O95206 1070 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 EPN2O95208 641 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 ETHE1O95571 254 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 MYF6P23409 242 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 DRD3P35462 400 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 HPCAL1P37235 193 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 MTHFRP42898 656 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 RPS13P62277 151 aaKnown RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 RAE1P78406 368 aaKnown RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 TAP2Q03519 686 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 LAPTM5Q13571 262 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 APOFQ13790 326 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 SLBPQ14493 270 aaKnown RBP eCLIP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 PON2Q15165 354 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 SLC36A3Q495N2 470 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 PYCR3Q53H96 274 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 CATSPEREQ5SY80 951 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 THEMIS2Q5TEJ8 643 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 ADNP2Q6IQ32 1131 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 FAM83HQ6ZRV2 1179 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 SERPINA11Q86U17 422 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 PDZD3Q86UT5 571 aa12.48□□□□□ -0.41
SPTLC1-201ENST00000262554 LRRTM4Q86VH4 590 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms