RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 COLEC12Q5KU26 742 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 UTP15Q8TED0 518 aaKnown RBP14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 PROX1Q92786 737 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 ZNF641Q96N77 438 aaPredicted RBP14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 KCNH6Q9H252 994 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 MAGEE1Q9HCI5 957 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 SERHLQ9NQF3 203 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 FABP3P05413 133 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 NUDT7P0C024 238 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 POU2F1P14859 743 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 GABARAPL2P60520 117 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 PPIGQ13427 754 aaKnown RBP eCLIP14.04□□□□□ -0.161e-6■■□□□ 13.9
SFSWAP-201ENST00000261674 INAVAQ3KP66 663 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 SYTL1Q8IYJ3 562 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 PIH1D2Q8WWB5 315 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 PDLIM5Q96HC4 596 aaKnown RBP14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 HSH2DQ96JZ2 352 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 SAMD4AQ9UPU9 718 aaKnown RBP14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 SH3BP1Q9Y3L3 701 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 TESMINQ9Y4I5 508 aa14.04□□□□□ -0.16
SFSWAP-201ENST00000261674 EFCAB9A8MZ26 197 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 M0R129 80 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 SLC22A1O15245 554 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 DLGAP3O95886 979 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 RAB15P59190 212 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 RPP38P78345 283 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 CREMQ03060 361 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 ABHD18Q0P651 414 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 OXA1LQ15070 435 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 SOWAHCQ53LP3 525 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 C1orf53Q5VUE5 145 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 C12orf76Q8N812 135 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 ARL14EPQ8N8R7 260 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 GPR156Q8NFN8 814 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 ZBTB20Q9HC78 741 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 SH3BP4Q9P0V3 963 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 MBD1Q9UIS9 605 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 CNOT3O75175 753 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 MYO1DO94832 1006 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 EPN2O95208 641 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 CLDN8P56748 225 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 CHIT1Q13231 466 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 SLC39A11Q8N1S5 342 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 POC5Q8NA72 575 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 GPR26Q8NDV2 337 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 SLC32A1Q9H598 525 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 MRPL17Q9NRX2 175 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 HCFC1R1Q9NWW0 138 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 THG1LQ9NWX6 298 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 GIN1Q9NXP7 522 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 PMF1-BGLAPU3KQ54 211 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 CCL16O15467 120 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 CCNDBP1O95273 360 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 ZDHHC11BP0C7U3 371 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 ACRV1P26436 265 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 CD6P30203 668 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 KDELR2P33947 212 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 NKX2-5P52952 324 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 SLC35A2P78381 396 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 GBX1Q14549 363 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 GPRC6AQ5T6X5 926 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 SHQ1Q6PI26 577 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 TRIM46Q7Z4K8 759 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 POF1BQ8WVV4 589 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 MED8Q96G25 268 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 RAPGEFL1Q9UHV5 662 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 SNX6Q9UNH7 406 aa14.03□□□□□ -0.16
SFSWAP-201ENST00000261674 FAM220BPB1ANY3 271 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 H7C0S8 307 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 GAPDHSO14556 408 aaPredicted RBP14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 GRM6O15303 877 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 SLC16A6O15403 523 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 SERPINB1P30740 379 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 RYKP34925 604 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 KRT20P35900 424 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 OR1E2P47887 323 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 IRF8Q02556 426 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 MRPL58Q14197 206 aaKnown RBP14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 TXNDC8Q6A555 127 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 CYP2U1Q7Z449 544 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 BEND7Q8N7W2 519 aaPredicted RBP14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 S100ZQ8WXG8 99 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 SPATA17Q96L03 361 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 MROQ9BYG7 248 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 DCSTAMPQ9H295 470 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 SIRT5Q9NXA8 310 aa14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 THUMPD1Q9NXG2 353 aaKnown RBP14.02□□□□□ -0.16
SFSWAP-201ENST00000261674 TMEM221A6NGB7 291 aa14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 JRKO75564 520 aa14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 GABARAPO95166 117 aa14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 GBAP04062 536 aa14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 GTF2E2P29084 291 aaKnown RBP14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 CCR7P32248 378 aa14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 STK19P49842 368 aaPredicted RBP14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 ATP13A5Q4VNC0 1218 aa14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 FOXJ1Q92949 421 aa14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 SH3KBP1Q96B97 665 aa14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 ZNF689Q96CS4 500 aaPredicted RBP14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 COPS8Q99627 209 aa14.02□□□□□ -0.17
SFSWAP-201ENST00000261674 RNF167Q9H6Y7 350 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms