RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 AKR1A1P14550 325 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 MAPK1P28482 360 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 RPL9P32969 192 aaKnown RBP9.82□□□□□ -0.84
PALB2-201ENST00000261584 KRT20P35900 424 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 SCNN1AP37088 669 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 MAP2K5Q13163 448 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 ZNF792Q3KQV3 632 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 KLHL12Q53G59 568 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 STEAP3Q658P3 488 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 IQCF1Q8N6M8 205 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 ZNF675Q8TD23 568 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 LKAAEAR1Q8TD35 194 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 ALOXE3Q9BYJ1 711 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 H2AFY2Q9P0M6 372 aaPredicted RBP9.82□□□□□ -0.84
PALB2-201ENST00000261584 PRSS21Q9Y6M0 314 aa9.82□□□□□ -0.84
PALB2-201ENST00000261584 NHSQ6T4R5 1651 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 TOXO94900 526 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 CCNYL3P0C7X3 344 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 CYP2A7P20853 494 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 GJA5P36382 358 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 CLK3P49761 638 aaKnown RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 VLDLRP98155 873 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 SCAPQ12770 1279 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 CRTC2Q53ET0 693 aaPredicted RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 ZNF697Q5TEC3 545 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 TTC23LQ6PF05 361 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 SLC5A8Q8N695 610 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 ARRDC2Q8TBH0 407 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 CD200R1Q8TD46 325 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 STARD8Q92502 1023 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 PHOX2BQ99453 314 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 CACYBPQ9HB71 228 aaKnown RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 TMEM9Q9P0T7 183 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 PLAGL1Q9UM63 463 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 SPIN1Q9Y657 262 aaPredicted RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 A0A1W2PPK0 400 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 FABP12A6NFH5 140 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 SMLR1H3BR10 107 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 FZD9O00144 591 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 RTCAO00442 366 aaKnown RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 F2P00734 622 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 LAMP1P11279 417 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 PAX3P23760 479 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 GP2P55259 537 aaKnown RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 QPRTQ15274 297 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 TAF1AQ15573 450 aaPredicted RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 KCNA10Q16322 511 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 SETMARQ53H47 684 aaPredicted RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 KIAA1614Q5VZ46 1190 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 CADM2Q8N3J6 435 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 AQP11Q8NBQ7 271 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 CENPOQ9BU64 300 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 DUSP26Q9BV47 211 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 IL1RAPQ9NPH3 570 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 NUDT4Q9NZJ9 180 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 ENPP5Q9UJA9 477 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 HSPB11Q9Y547 144 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 PAPSS2O95340 614 aaPredicted RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 ESR1P03372 595 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 MYL12AP19105 171 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 PTGER3P43115 390 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 NPRL3Q12980 569 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 B3GLCTQ6Y288 498 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 SVOPLQ8N434 492 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 HJURPQ8NCD3 748 aaPredicted RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 PDPRQ8NCN5 879 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 CHPT1Q8WUD6 406 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 PPP1R14BQ96C90 147 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 L3HYPDHQ96EM0 354 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 SPRTNQ9H040 489 aaPredicted RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 RHBGQ9H310 441 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 TRIT1Q9H3H1 467 aaKnown RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 FLRT1Q9NZU1 646 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 LSM7Q9UK45 103 aaKnown RBP9.81□□□□□ -0.84
PALB2-201ENST00000261584 MCM3APO60318 1980 aa9.81□□□□□ -0.84
PALB2-201ENST00000261584 TRBV23OR9-2A0A075B6M9 112 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 A0A1W2PQ72 361 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ILVBLA1L0T0 632 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ZNF487B1APH4 448 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 AP3D1O14617 1153 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 SMAD6O43541 496 aaKnown RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 TLX2O43763 284 aaPredicted RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 GUCY1B2O75343 617 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ATXN1LP0C7T5 689 aaKnown RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 OGNP20774 298 aaKnown RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 ADRA1AP35348 466 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 LIPAP38571 399 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 BDKRB1P46663 353 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 MVKQ03426 396 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 CACNG1Q06432 222 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 TARDBPQ13148 414 aaKnown RBP eCLIP9.8□□□□□ -0.84
PALB2-201ENST00000261584 BCL7AQ4VC05 210 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 SERPINA13PQ6UXR4 307 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 CYHR1Q6ZMK1 362 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ZNF517Q6ZMY9 492 aaPredicted RBP9.8□□□□□ -0.84
PALB2-201ENST00000261584 BBS7Q8IWZ6 715 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 TCEANCQ8N8B7 351 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 WACQ9BTA9 647 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 C2orf78A6NCI8 922 aa9.8□□□□□ -0.84
PALB2-201ENST00000261584 ASPDHA6ND91 283 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms