RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 FLRT1Q9NZU1 646 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF639Q9UID6 485 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 RNF11Q9Y3C5 154 aa11.79□□□□□ -0.52
COL8A1-201ENST00000261037 LOC100509620A0A075B734 347 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 CA12O43570 354 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 CHRNA1P02708 482 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 KCNJ5P48544 419 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 NUDT6P53370 316 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 PITPNAQ00169 270 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 DSC3Q14574 896 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 CYP1B1Q16678 543 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 SUSD1Q6UWL2 747 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 MTMR14Q8NCE2 650 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 CRELD1Q96HD1 420 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 FAM124BQ9H5Z6 455 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 RHCGQ9UBD6 479 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 PRDM4Q9UKN5 801 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 RPL36Q9Y3U8 105 aaKnown RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 TRAPPC6AO75865 159 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 OR7A10O76100 309 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 PTX3P26022 381 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 DCDC1P59894 354 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 RAB8AP61006 207 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 RPS13P62277 151 aaKnown RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 CD47Q08722 323 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 SCGB2B2Q4G0G5 96 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 LRRC70Q7Z2Q7 622 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 CEP97Q8IW35 865 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 TTLQ8NG68 377 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 JPH3Q8WXH2 748 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 TTYH1Q9H313 450 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 SPATA7Q9P0W8 599 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF69Q9UC07 566 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 TRBC2A0A5B9 178 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 SMIM30A4D0T7 59 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 PCP4L1A6NKN8 68 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 H3BNX3 289 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 MANBAO00462 879 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 PRKD3O94806 890 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 CCL5P13501 91 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 HADHBP55084 474 aaKnown RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF280AP59817 542 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 MEF2AQ02078 507 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 RASGEF1BQ0VAM2 473 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 MERTKQ12866 999 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 KCNJ11Q14654 390 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 NPTX1Q15818 432 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 DUOXA1Q1HG43 343 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 RBM48Q5RL73 367 aaKnown RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF782Q6ZMW2 699 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 SLC30A8Q8IWU4 369 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 NTAN1Q96AB6 310 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 CMTM7Q96FZ5 175 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 SQORQ9Y6N5 450 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 MYOCOSA0A1B0GUC4 107 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 ILVBLA1L0T0 632 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 OR14I1A6ND48 311 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 FOSL2P15408 326 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 PRPS1L1P21108 318 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 OGDHQ02218 1023 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 C4orf46Q504U0 113 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 SPIN4Q56A73 249 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 ACSBG2Q5FVE4 666 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 HSDL2Q6YN16 418 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 PLA2G15Q8NCC3 412 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF548Q8NEK5 533 aaPredicted RBP11.78□□□□□ -0.52
COL8A1-201ENST00000261037 OR52E4Q8NGH9 312 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 OAZ3Q9UMX2 235 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 PLIN4Q96Q06 1357 aa11.78□□□□□ -0.52
COL8A1-201ENST00000261037 EDDM13A0A1B0GTR0 161 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 TNFRSF10BO14763 440 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 POP7O75817 140 aaKnown RBP11.77□□□□□ -0.52
COL8A1-201ENST00000261037 AHSGP02765 367 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 CD2P06729 351 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 GSTT2BP0CG30 244 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 CKMT2P17540 419 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 AGXTP21549 392 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 CASRP41180 1078 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 OR3A3P47888 321 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 OR3A2P47893 321 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF234Q14588 700 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 SYT16Q17RD7 645 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 UAP1L1Q3KQV9 507 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 ARHGAP40Q5TG30 622 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 C1orf94Q6P1W5 598 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 CNKSR3Q6P9H4 555 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 MARCH9Q86YJ5 346 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 GALNT15Q8N3T1 639 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 CELF5Q8N6W0 485 aaKnown RBP11.77□□□□□ -0.52
COL8A1-201ENST00000261037 DNAJA3Q96EY1 480 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF599Q96NL3 588 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 RBCK1Q9BYM8 510 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 MAGEE1Q9HCI5 957 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 ZDHHC18Q9NUE0 388 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 GIMAP2Q9UG22 337 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 NPIPA5E9PKD4 350 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 J3QLW9 94 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 SCDO00767 359 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 SOX14O95416 240 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 203.1 ms