RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 IRF8Q02556 426 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 TAP2Q03519 686 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 RIPK1Q13546 671 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 CYLC2Q14093 348 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-201ENST00000258962 NR6A1Q15406 480 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 ATP6AP1LQ52LC2 224 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 AGKQ53H12 422 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 SGO1Q5FBB7 561 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 CAPN13Q6MZZ7 669 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-201ENST00000258962 PHACTR4Q8IZ21 702 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 LMX1AQ8TE12 382 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 NRTNQ99748 197 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 SDR39U1Q9NRG7 319 aaPredicted RBP16.85■□□□□ 0.29
SRSF1-201ENST00000258962 UCKL1Q9NWZ5 548 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 APOBEC3BQ9UH17 382 aaKnown RBP16.85■□□□□ 0.29
SRSF1-201ENST00000258962 KLF15Q9UIH9 416 aa16.85■□□□□ 0.29
SRSF1-201ENST00000258962 SLC28A1O00337 649 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 TNFSF14O43557 240 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 PDYNP01213 254 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 KRT6AP02538 564 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 KRT6BP04259 564 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 RPN2P04844 631 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 CTSEP14091 401 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 ITGAXP20702 1163 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 KRT6CP48668 564 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 ACADVLP49748 655 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 STX1BP61266 288 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 MXRA7P84157 204 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 SLC25A3Q00325 362 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 PRKG2Q13237 762 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 DOC2AQ14183 400 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 E2F2Q14209 437 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 CLCA4Q14CN2 919 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 GSTA3Q16772 222 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 DNAL1Q4LDG9 190 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 PRRT3Q5FWE3 981 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 XKR6Q5GH73 641 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 LIPJQ5W064 366 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 CYB5D1Q6P9G0 228 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 PAOXQ6QHF9 649 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 KANSL1Q7Z3B3 1105 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 GLRX5Q86SX6 157 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 FUNDC1Q8IVP5 155 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 TBC1D21Q8IYX1 336 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 ZNF548Q8NEK5 533 aaPredicted RBP16.84■□□□□ 0.29
SRSF1-201ENST00000258962 NEIL2Q969S2 332 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 TSACCQ96A04 125 aaPredicted RBP16.84■□□□□ 0.29
SRSF1-201ENST00000258962 RCN3Q96D15 328 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 SLC45A3Q96JT2 553 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 MAGEB10Q96LZ2 347 aaPredicted RBP16.84■□□□□ 0.29
SRSF1-201ENST00000258962 C12orf66Q96MD2 445 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 C1orf50Q9BV19 199 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 TRIT1Q9H3H1 467 aaKnown RBP16.84■□□□□ 0.29
SRSF1-201ENST00000258962 GPRC5BQ9NZH0 403 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 CCDC167Q9P0B6 97 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 SNX6Q9UNH7 406 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 TDRKHQ9Y2W6 561 aaKnown RBP16.84■□□□□ 0.29
SRSF1-201ENST00000258962 CSNK1G3Q9Y6M4 447 aa16.84■□□□□ 0.29
SRSF1-201ENST00000258962 A8MUI8 341 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 TNFRSF10CO14798 259 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 CLGNO14967 610 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 AQP9O43315 295 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 RGS14O43566 566 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 TNFP01375 233 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 IDO1P14902 403 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 NPPBP16860 134 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 IDSP22304 550 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 NME5P56597 212 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 IRX1P78414 480 aaPredicted RBP16.83■□□□□ 0.28
SRSF1-201ENST00000258962 HMGCS1Q01581 520 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 ALG11Q2TAA5 492 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 GRHL2Q6ISB3 625 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 SUSD1Q6UWL2 747 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 SLCO4C1Q6ZQN7 724 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 MIER2Q8N344 545 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 FNDC5Q8NAU1 212 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 BAHD1Q8TBE0 780 aaPredicted RBP16.83■□□□□ 0.28
SRSF1-201ENST00000258962 MCUR1Q96AQ8 359 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 MTFMTQ96DP5 389 aaKnown RBP16.83■□□□□ 0.28
SRSF1-201ENST00000258962 CNDP2Q96KP4 475 aaKnown RBP16.83■□□□□ 0.28
SRSF1-201ENST00000258962 PPP3R2Q96LZ3 170 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 DUSP23Q9BVJ7 150 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 ACPTQ9BZG2 426 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 BRINP2Q9C0B6 783 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 CCDC177Q9NQR7 707 aaPredicted RBP16.83■□□□□ 0.28
SRSF1-201ENST00000258962 PRDM8Q9NQV8 689 aa16.83■□□□□ 0.28
SRSF1-201ENST00000258962 MGRN1O60291 552 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 VARSP26640 1264 aaKnown RBP16.82■□□□□ 0.28
SRSF1-201ENST00000258962 CASP2P42575 452 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 NEK2P51955 445 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 EMX2Q04743 252 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 ELOCQ15369 112 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 MAPRE2Q15555 327 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 AP5B1Q2VPB7 878 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 RFTN2Q52LD8 501 aaPredicted RBP16.82■□□□□ 0.28
SRSF1-201ENST00000258962 FRG2Q64ET8 278 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 PARP9Q8IXQ6 854 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 FAM13CQ8NE31 585 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 OR4C6Q8NH72 309 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 SELENOMQ8WWX9 145 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms