RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 UAP1L1Q3KQV9 507 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 USP39Q53GS9 565 aaKnown RBP18.23■□□□□ 0.51
TRIM47-201ENST00000254816 PAGE3Q5JUK9 113 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 SLC22A18ASQ8N1D0 253 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 APOLD1Q96LR9 279 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 CAMK1GQ96NX5 476 aa18.23■□□□□ 0.51
TRIM47-201ENST00000254816 ARHGEF17Q96PE2 2063 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-201ENST00000254816 HEATR5BQ9P2D3 2071 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 SNRNP200O75643 2136 aaKnown RBP18.22■□□□□ 0.51
TRIM47-201ENST00000254816 A0A1W2PP18 115 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 FAM234BA2RU67 622 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 CASQ2O14958 399 aaPredicted RBP18.22■□□□□ 0.51
TRIM47-201ENST00000254816 ETHE1O95571 254 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 BCKDHAP12694 445 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 DGKQP52824 942 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 CAPRIN1Q14444 709 aaKnown RBP18.22■□□□□ 0.51
TRIM47-201ENST00000254816 CACHD1Q5VU97 1274 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 ATG9BQ674R7 924 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 NXPE4Q6UWF7 544 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 HID1Q8IV36 788 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 KRTCAP2Q8N6L1 136 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 LINC01555Q8NAE3 123 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 PCYOX1LQ8NBM8 494 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 ZNF740Q8NDX6 193 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 HUS1BQ8NHY5 278 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 CMTM7Q96FZ5 175 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 EBPLQ9BY08 206 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 CROTQ9UKG9 612 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 PCDHGA11Q9Y5H2 935 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 HS3ST3A1Q9Y663 406 aa18.22■□□□□ 0.51
TRIM47-201ENST00000254816 PRAMEF26H0Y7S4 382 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 STK25O00506 426 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 KCNJ13O60928 360 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 TACR1P25103 407 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SRP54P61011 504 aaKnown RBP18.21■□□□□ 0.51
TRIM47-201ENST00000254816 E2F2Q14209 437 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 RPE65Q16518 533 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 CYP2A13Q16696 494 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 ALG11Q2TAA5 492 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SMU1Q2TAY7 513 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 OGFRL1Q5TC84 451 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-201ENST00000254816 MED27Q6P2C8 311 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SLC30A9Q6PML9 568 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 LCTLQ6UWM7 567 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SETD7Q8WTS6 366 aaKnown RBP18.21■□□□□ 0.51
TRIM47-201ENST00000254816 JPH3Q8WXH2 748 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SH3KBP1Q96B97 665 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 TRIM8Q9BZR9 551 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 COPS7BQ9H9Q2 264 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-201ENST00000254816 GON4LQ3T8J9 2241 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 TRBV23OR9-2A0A075B6M9 112 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 IGHV1OR15-9A0A0B4J2B8 117 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SERTM1A2A2V5 107 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 PIPSLA2A3N6 862 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 TXNDC9O14530 226 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 ACOT8O14734 319 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 AMD1P17707 334 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 PRPH2P23942 346 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 CCR5P51681 352 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 YPEL5P62699 121 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 CSTF3Q12996 717 aaKnown RBP18.21■□□□□ 0.51
TRIM47-201ENST00000254816 C8orf82Q6P1X6 216 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SLC2A7Q6PXP3 512 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SPATA24Q86W54 205 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 PCDHAC1Q9H158 963 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SPATA6Q9NWH7 488 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-201ENST00000254816 CUEDC1Q9NWM3 386 aaPredicted RBP18.21■□□□□ 0.51
TRIM47-201ENST00000254816 SLAMF8Q9P0V8 285 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 DTNAQ9Y4J8 743 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 CEP192Q8TEP8 1941 aa18.21■□□□□ 0.51
TRIM47-201ENST00000254816 VCANP13611 3396 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 A0A1W2PPV9 198 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 BCAS2O75934 225 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-201ENST00000254816 UQCRBP14927 111 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 RPS13P62277 151 aaKnown RBP18.2■□□□□ 0.5
TRIM47-201ENST00000254816 ARHGAP19Q14CB8 494 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 TLR1Q15399 786 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 ZNF542PQ5EBM4 170 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 PRPF38BQ5VTL8 546 aaKnown RBP18.2■□□□□ 0.5
TRIM47-201ENST00000254816 HOMEZQ8IX15 550 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 LILRA2Q8N149 483 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 OR52E1Q8NGJ3 308 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 WDR34Q96EX3 536 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 SHDQ96IW2 340 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 TSSK3Q96PN8 268 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 DPY30Q9C005 99 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 C6orf203Q9P0P8 240 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-201ENST00000254816 SPATA7Q9P0W8 599 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 VPS29Q9UBQ0 182 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 TRIM38O00635 465 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 JAK1P23458 1154 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 OXTRP30559 389 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 ACTR1BP42025 376 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 ACTR1AP61163 376 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 PLIN5Q00G26 463 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 HACD2Q6Y1H2 254 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 ABI3BPQ7Z7G0 1075 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 ROPN1LQ96C74 230 aa18.2■□□□□ 0.5
TRIM47-201ENST00000254816 TCEAL2Q9H3H9 227 aaPredicted RBP18.2■□□□□ 0.5
TRIM47-201ENST00000254816 TBC1D17Q9HA65 648 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms