RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MED16Q9Y2X0 877 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 MAU2Q9Y6X3 613 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 F8P00451 2351 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 CELSR1Q9NYQ6 3014 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 SCN3AQ9NY46 2000 aa9.82□□□□□ -0.84
VPS50-201ENST00000251739 CSMD2Q7Z408 3487 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 A0A0J9YVX5 310 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 TMEM229AB2RXF0 380 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 IDSB3KWA1 339 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 H0YGG7 62 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 MAP2K7O14733 419 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 PSIP1O75475 530 aaKnown RBP9.81□□□□□ -0.84
VPS50-201ENST00000251739 NDUFS3O75489 264 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 VAPBO95292 243 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 ESR1P03372 595 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 STSP08842 583 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 PRR35P0CG20 571 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 TPSB2P20231 275 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 CDC25BP30305 580 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 MAGEA6P43360 314 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 NPY2RP49146 381 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 TDGF1P3P51864 188 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 EFNA3P52797 238 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 ARF3P61204 181 aaPredicted RBP9.81□□□□□ -0.84
VPS50-201ENST00000251739 CDK16Q00536 496 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 ELOAQ14241 798 aaKnown RBP9.81□□□□□ -0.84
VPS50-201ENST00000251739 ARHGAP19Q14CB8 494 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 TPSAB1Q15661 275 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 RNF187Q5TA31 235 aaPredicted RBP9.81□□□□□ -0.84
VPS50-201ENST00000251739 IRAK1BP1Q5VVH5 260 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 ARMC3Q5W041 872 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 KIAA0930Q6ICG6 404 aaPredicted RBP9.81□□□□□ -0.84
VPS50-201ENST00000251739 FBXO42Q6P3S6 717 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 C4orf22Q6V702 233 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 CENPUQ71F23 418 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 GAS2L3Q86XJ1 694 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 RAB42Q8N4Z0 105 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 MIEF2Q96C03 454 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 C8orf44Q96CB5 159 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 TCF12Q99081 682 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 PLCD4Q9BRC7 762 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 DPH7Q9BTV6 452 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 TGIF2Q9GZN2 237 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 SYBUQ9NX95 663 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 BFARQ9NZS9 450 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 GALPQ9UBC7 116 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 ZC3H7BQ9UGR2 993 aaKnown RBP9.81□□□□□ -0.84
VPS50-201ENST00000251739 C3orf18Q9UK00 162 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 SOX13Q9UN79 622 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 ZKSCAN5Q9Y2L8 839 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 MRPS2Q9Y399 296 aaKnown RBP9.81□□□□□ -0.84
VPS50-201ENST00000251739 AKAP9Q99996 3911 aa9.81□□□□□ -0.84
VPS50-201ENST00000251739 LOC102723996A0A087X1L8 192 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 TCRBV7S3A2A0A539 114 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 H3BMM5 538 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 AP3B1O00203 1094 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 FOXS1O43638 330 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 USP1O94782 785 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 SERPINA7P05543 415 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 OGNP20774 298 aaKnown RBP9.8□□□□□ -0.84
VPS50-201ENST00000251739 FBLP22087 321 aaKnown RBP9.8□□□□□ -0.84
VPS50-201ENST00000251739 FDXRP22570 491 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 MGAT1P26572 445 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 CMPK1P30085 196 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 TNFSF10P50591 281 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 CLCN7P51798 805 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 SNRPNP63162 240 aaKnown RBP9.8□□□□□ -0.84
VPS50-201ENST00000251739 BASP1P80723 227 aaKnown RBP9.8□□□□□ -0.84
VPS50-201ENST00000251739 RELAQ04206 551 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 OCA2Q04671 838 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 CDC16Q13042 620 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 KCNJ11Q14654 390 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 INAQ16352 499 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 ACSBG2Q5FVE4 666 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 VWA2Q5GFL6 755 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 C1QL3Q5VWW1 255 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 MRNIPQ6NTE8 343 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 LRRC8BQ6P9F7 803 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 CES3Q6UWW8 571 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 LINC00696Q6ZRV3 163 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 NDUFAF7Q7L592 441 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 LRRC56Q8IYG6 542 aaPredicted RBP9.8□□□□□ -0.84
VPS50-201ENST00000251739 FBXO15Q8NCQ5 510 aaPredicted RBP9.8□□□□□ -0.84
VPS50-201ENST00000251739 OR9A1PQ8NGU1 263 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 GIMAP7Q8NHV1 300 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 GSDMBQ8TAX9 411 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 MAGEC3Q8TD91 643 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 SKA2Q8WVK7 121 aaPredicted RBP9.8□□□□□ -0.84
VPS50-201ENST00000251739 SMPDL3AQ92484 453 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 CNDP1Q96KN2 507 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 FOPNLQ96NB1 174 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 OR2A5Q96R48 311 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 TAAR6Q96RI8 345 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 ACAT2Q9BWD1 397 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 TSGA10Q9BZW7 698 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 ZNF160Q9HCG1 818 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 C14orf105Q9NVL8 296 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 STOX2Q9P2F5 926 aaPredicted RBP9.8□□□□□ -0.84
VPS50-201ENST00000251739 GUCA1BQ9UMX6 200 aa9.8□□□□□ -0.84
VPS50-201ENST00000251739 OSGIN2Q9Y236 505 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms