RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 RRM2P31350 389 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 SEPHS1P49903 392 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 CDH12P55289 794 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 ISL1P61371 349 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 SPIBQ01892 262 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 AQP6Q13520 282 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 TUBA3CQ13748 450 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 KIAA0040Q15053 153 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 DCDC5Q6ZRR9 648 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 BTLAQ7Z6A9 289 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 THOC6Q86W42 341 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 ADAMTS16Q8TE57 1224 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 RDH12Q96NR8 316 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 TMEM165Q9HC07 324 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 ZNF639Q9UID6 485 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 VWA8A3KMH1 1905 aa12.22□□□□□ -0.45
RAB3IP-201ENST00000247833 PRSS23O95084 383 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 POP4O95707 220 aaKnown RBP12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 LCKP06239 509 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 CD36P16671 472 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 AOAHP28039 575 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 HLA-FP30511 346 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 DNAJA1P31689 397 aaKnown RBP12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 ALDH9A1P49189 494 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 POLR2LP62875 67 aaKnown RBP12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 PTSQ03393 145 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 CBX3Q13185 183 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 DOC2AQ14183 400 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 ZNF846Q147U1 533 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 IER5LQ5T953 404 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 C11orf74Q86VG3 221 aa12.21□□□□□ -0.45
RAB3IP-201ENST00000247833 M0R129 80 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TSPAN6O43657 245 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 CPNE6O95741 557 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TGFB1P01137 390 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 SERPIND1P05546 499 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 SCN4AP35499 1836 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TM4SF4P48230 202 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TMED10P49755 219 aaKnown RBP12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 DAPP51397 102 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 ARSIQ5FYB1 569 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 ZNF691Q5VV52 312 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 AGTRAPQ6RW13 159 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 Q6ZNX1 250 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 GAREM2Q75VX8 874 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 STX19Q8N4C7 294 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 SVOPQ8N4V2 548 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 USP7Q93009 1102 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 KLHL25Q9H0H3 589 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 ZNF556Q9HAH1 456 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 ACSL6Q9UKU0 697 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 CDH7Q9ULB5 785 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TMEM202A6NGA9 273 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 LEFTY2O00292 366 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 C8AP07357 584 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 FPR1P21462 350 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TGFBR1P36897 503 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 SPINT3P49223 89 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 MLLT10P55197 1068 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 B4GALNT1Q00973 533 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 SRSF11Q05519 484 aaKnown RBP12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 CCSMST1Q4G0I0 132 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 B3GNT8Q7Z7M8 397 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TCAIMQ8N3R3 496 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 ZFP90Q8TF47 636 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 GTPBP3Q969Y2 492 aaKnown RBP12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TCF25Q9BQ70 676 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 SLC12A9Q9BXP2 914 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 RNF208Q9H0X6 261 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 RETREG1Q9H6L5 497 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 PAK1IP1Q9NWT1 392 aaPredicted RBP12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 RAB23Q9ULC3 237 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TRIM17Q9Y577 477 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 OR51B4Q9Y5P0 310 aa12.21□□□□□ -0.46
RAB3IP-201ENST00000247833 TRPM7Q96QT4 1865 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 ANKRD36A6QL64 1941 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 TNFRSF11BO00300 401 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 IGHA2P01877 340 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 AMD1P17707 334 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 HPCAL1P37235 193 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 RPP38P78345 283 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 TLE2Q04725 743 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 GANABQ14697 944 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 ZNF697Q5TEC3 545 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 C11orf96Q7Z7L8 435 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 TRIM73Q86UV7 250 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 MCFD2Q8NI22 146 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 HTRA1Q92743 480 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 TANKQ92844 425 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 EPS8L2Q9H6S3 715 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 DUSP12Q9UNI6 340 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 LINC00854A0A1B0GVQ3 168 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 FUOMA2VDF0 154 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 FUCA1P04066 466 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 HTR1AP08908 422 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 GPNMBQ14956 572 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 TMEM220Q6QAJ8 160 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 PROX1Q92786 737 aa12.2□□□□□ -0.46
RAB3IP-201ENST00000247833 COPS4Q9BT78 406 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms