RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ABRQ12979 859 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 IL18R1Q13478 541 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 PGS1Q32NB8 556 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 RFX4Q33E94 735 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 ZNF658BQ4V348 819 aaPredicted RBP21.21■□□□□ 0.99
RNF39-201ENST00000244360 GRHL2Q6ISB3 625 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 ERAP2Q6P179 960 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 DUS1LQ6P1R4 473 aaKnown RBP21.21■□□□□ 0.99
RNF39-201ENST00000244360 AGTRAPQ6RW13 159 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 ANKRD46Q86W74 232 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 SLC22A15Q8IZD6 547 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 EID3Q8N140 333 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 OR5K1Q8NHB7 308 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 SNX19Q92543 992 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 C11orf24Q96F05 449 aaPredicted RBP21.21■□□□□ 0.99
RNF39-201ENST00000244360 METTL2AQ96IZ6 378 aaKnown RBP21.21■□□□□ 0.99
RNF39-201ENST00000244360 LRRC3BQ96PB8 259 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 GPRC5BQ9NZH0 403 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 PDE4DIPQ5VU43 2346 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 H0YIV9 168 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 HOXC11O43248 304 aaPredicted RBP21.21■□□□□ 0.99
RNF39-201ENST00000244360 CATP04040 527 aaKnown RBP21.21■□□□□ 0.99
RNF39-201ENST00000244360 HSD3B1P14060 373 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 HSD3B2P26439 372 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 WEE1P30291 646 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 KIR3DL1P43629 444 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 TRPC1P48995 793 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 UBE3AQ05086 875 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 PPIGQ13427 754 aaKnown RBP eCLIP21.21■□□□□ 0.99
RNF39-201ENST00000244360 DOC2AQ14183 400 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 XKR6Q5GH73 641 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 C6orf141Q5SZD1 244 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 OR56A3Q8NH54 315 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 GIPC3Q8TF64 312 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 NELL1Q92832 810 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 AP2M1Q96CW1 435 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 PLEKHA8Q96JA3 519 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 MBOAT4Q96T53 435 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 VPS29Q9UBQ0 182 aa21.21■□□□□ 0.99
RNF39-201ENST00000244360 LAMA2P24043 3122 aaKnown RBP21.21■□□□□ 0.99
RNF39-201ENST00000244360 E7EQ34 232 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 NPC1O15118 1278 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 GSNP06396 782 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 POU2F2P09086 479 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 ADH5P11766 374 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 CD247P20963 164 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 IRS1P35568 1242 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 HNF4AP41235 474 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 PREPP48147 710 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 TMEM115Q12893 351 aaPredicted RBP21.2■□□□□ 0.98
RNF39-201ENST00000244360 BNIP3Q12983 259 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 NLRP8Q86W28 1048 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 SPARTQ8N0X7 666 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 ZCCHC7Q8N3Z6 543 aaKnown RBP21.2■□□□□ 0.98
RNF39-201ENST00000244360 RNF175Q8N4F7 328 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 CHDHQ8NE62 594 aaPredicted RBP21.2■□□□□ 0.98
RNF39-201ENST00000244360 TRUB1Q8WWH5 349 aaKnown RBP21.2■□□□□ 0.98
RNF39-201ENST00000244360 ING5Q8WYH8 240 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 COX4I2Q96KJ9 171 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 COQ10AQ96MF6 247 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 OR4K3Q96R72 315 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 EPHX3Q9H6B9 360 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 SLC27A6Q9Y2P4 619 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 RFXANKO14593 260 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 ZNF197O14709 1029 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 SPINT1O43278 529 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 B4GAT1O43505 415 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 LRATO95237 230 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 SRSF11Q05519 484 aaKnown RBP21.2■□□□□ 0.98
RNF39-201ENST00000244360 CAMK1Q14012 370 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 E2F2Q14209 437 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 GRIN2CQ14957 1233 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 ACOX1Q15067 660 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 UGT8Q16880 541 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 POM121L1PQ3SYA9 428 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 CCSMST1Q4G0I0 132 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 OR4F3Q6IEY1 312 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 LILRA3Q8N6C8 439 aaPredicted RBP21.2■□□□□ 0.98
RNF39-201ENST00000244360 KIAA1958Q8N8K9 716 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 NCLNQ969V3 563 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 ZNF707Q96C28 371 aaPredicted RBP21.2■□□□□ 0.98
RNF39-201ENST00000244360 DTD2Q96FN9 168 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 LHPPQ9H008 270 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 THG1LQ9NWX6 298 aaKnown RBP21.2■□□□□ 0.98
RNF39-201ENST00000244360 FAM8A1Q9UBU6 413 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 UTS2RQ9UKP6 389 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 PCDHGA8Q9Y5G5 932 aa21.2■□□□□ 0.98
RNF39-201ENST00000244360 MAGED1Q9Y5V3 778 aaPredicted RBP21.2■□□□□ 0.98
RNF39-201ENST00000244360 SCN2BO60939 215 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 RECQL5O94762 991 aaPredicted RBP21.19■□□□□ 0.98
RNF39-201ENST00000244360 IMPA1P29218 277 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 NAE1Q13564 534 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 DUOXA1Q1HG43 343 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 TCEAL5Q5H9L2 206 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 GTF2IRD2BQ6EKJ0 949 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 ZNF551Q7Z340 670 aaPredicted RBP21.19■□□□□ 0.98
RNF39-201ENST00000244360 GTF2IRD2Q86UP8 949 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 C12orf40Q86WS4 652 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 SYT12Q8IV01 421 aa21.19■□□□□ 0.98
RNF39-201ENST00000244360 ZC3H7AQ8IWR0 971 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms