RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 GRM7Q14831 915 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 KIR2DS3Q14952 304 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 CDSNQ15517 529 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 SF1Q15637 639 aaKnown RBP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 GPR33Q49SQ1 333 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 FIGLAQ6QHK4 219 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 NCCRP1Q6ZVX7 275 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 CENPUQ71F23 418 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 ZNF534Q76KX8 674 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 LINC01555Q8NAE3 123 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 PPHLN1Q8NEY8 458 aaKnown RBP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 MYRIPQ8NFW9 859 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 STT3BQ8TCJ2 826 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 NACC2Q96BF6 587 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 TRIM56Q9BRZ2 755 aaKnown RBP13.16□□□□□ -0.3
DDX39A-201ENST00000242776 IL22Q9GZX6 179 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 CHRNA10Q9GZZ6 450 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 SAMD15Q9P1V8 674 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 TINAGQ9UJW2 476 aa13.16□□□□□ -0.3
DDX39A-201ENST00000242776 LIN7AO14910 233 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-201ENST00000242776 ZNHIT1O43257 154 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 PRICKLE3O43900 615 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-201ENST00000242776 EIF2S1P05198 315 aaKnown RBP13.15□□□□□ -0.3
DDX39A-201ENST00000242776 ZGLP1P0C6A0 271 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 PRR35P0CG20 571 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 PKLRP30613 574 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 GRIA1P42261 906 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 MAGEA3P43357 314 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 SESN2P58004 480 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-201ENST00000242776 OCA2Q04671 838 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 MSLNQ13421 630 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-201ENST00000242776 C3AR1Q16581 482 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 WASHC2DQ5SRD0 308 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 DENND5AQ6IQ26 1287 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 WDR93Q6P2C0 686 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 ZDHHC24Q6UX98 284 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 NLRP9Q7RTR0 991 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 LAPTM4BQ86VI4 370 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 CAND1Q86VP6 1230 aaKnown RBP13.15□□□□□ -0.3
DDX39A-201ENST00000242776 PSMF1Q92530 271 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 LRRC39Q96DD0 335 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 VPS50Q96JG6 964 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 TSPAN10Q9H1Z9 355 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-201ENST00000242776 SLC26A1Q9H2B4 701 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 ZNF304Q9HCX3 659 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 ZDHHC18Q9NUE0 388 aa13.15□□□□□ -0.3
DDX39A-201ENST00000242776 NXT1Q9UKK6 140 aaKnown RBP13.15□□□□□ -0.3
DDX39A-201ENST00000242776 NCOA6Q14686 2063 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-201ENST00000242776 TRBV5-4A0A0C4DH59 114 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 SDR42E2A6NKP2 422 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 VSTM2BA6NLU5 285 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 FAM227AF5H4B4 570 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 NRP2O60462 931 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 WFS1O76024 890 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 WDPCPO95876 746 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 FTH1P02794 183 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 MGAT1P26572 445 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 KIR3DL1P43629 444 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 POU6F1Q14863 301 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 TRADDQ15628 312 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 BBS9Q3SYG4 887 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 ZC3H12BQ5HYM0 836 aaKnown RBP13.14□□□□□ -0.31
DDX39A-201ENST00000242776 PCID2Q5JVF3 399 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 FRMPD2BQ6IN97 320 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 CASC4Q6P4E1 433 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 CNSTQ6PJW8 725 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 RPTNQ6XPR3 784 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 CDH24Q86UP0 819 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 VRK3Q8IV63 474 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 CEP97Q8IW35 865 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 DENND1AQ8TEH3 1009 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 ZC3H7BQ9UGR2 993 aaKnown RBP13.14□□□□□ -0.31
DDX39A-201ENST00000242776 NFU1Q9UMS0 254 aa13.14□□□□□ -0.31
DDX39A-201ENST00000242776 A0A0J9YVX5 310 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 SLC5A10A0PJK1 596 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 HYKKA2RU49 373 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 KRT87PA6NCN2 255 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 TP73O15350 636 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 OR1I1O60431 355 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 USP1O94782 785 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 AP2A2O94973 939 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 COX6A1P12074 109 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 ADRA1DP25100 572 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 PSMB5P28074 263 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 RAB28P51157 221 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 CASP6P55212 293 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 RBPJQ06330 500 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 CACNG1Q06432 222 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 DHX9Q08211 1270 aaKnown RBP13.13□□□□□ -0.31
DDX39A-201ENST00000242776 MTFR2Q6P444 385 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 NDUFAF7Q7L592 441 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 CCDC25Q86WR0 208 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 CDKN2AIPNLQ96HQ2 116 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 MIPEPQ99797 713 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 NAT9Q9BTE0 207 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 NLE1Q9NVX2 485 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-201ENST00000242776 SYBUQ9NX95 663 aa13.13□□□□□ -0.31
DDX39A-201ENST00000242776 ZNF282Q9UDV7 671 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-201ENST00000242776 MRPS2Q9Y399 296 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms