RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 EIF4E1BA6NMX2 242 aaKnown RBP22.45■■□□□ 1.18
MSX2-201ENST00000239243 GSTA4O15217 222 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 SLC35G4P0C7Q5 338 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 TRPC1P48995 793 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 DMPKQ09013 629 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 APLFQ8IW19 511 aaPredicted RBP22.45■■□□□ 1.18
MSX2-201ENST00000239243 PACRGLQ8N7B6 248 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 OR8J2Q8NGG1 315 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 OR10A6Q8NH74 314 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 OR14C36Q8NHC7 312 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 CHTF18Q8WVB6 975 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 CENPNQ96H22 339 aaPredicted RBP22.45■■□□□ 1.18
MSX2-201ENST00000239243 RMI1Q9H9A7 625 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 GEMIN8Q9NWZ8 242 aaKnown RBP22.45■■□□□ 1.18
MSX2-201ENST00000239243 FAM120CQ9NX05 1096 aaKnown RBP22.45■■□□□ 1.18
MSX2-201ENST00000239243 USP22Q9UPT9 525 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 OR1A2Q9Y585 309 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 RFXANKO14593 260 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 CDH1P12830 882 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 PDK3Q15120 406 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 C1orf52Q8N6N3 182 aaKnown RBP22.45■■□□□ 1.18
MSX2-201ENST00000239243 ZNF548Q8NEK5 533 aaPredicted RBP22.45■■□□□ 1.18
MSX2-201ENST00000239243 POP5Q969H6 163 aaKnown RBP22.45■■□□□ 1.18
MSX2-201ENST00000239243 ZNF597Q96LX8 424 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 SIRT5Q9NXA8 310 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 DLGAP2Q9P1A6 1054 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 TSC22D4Q9Y3Q8 395 aa22.45■■□□□ 1.18
MSX2-201ENST00000239243 C5orf42Q9H799 3197 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 ELOVL7A1L3X0 281 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 ERGP11308 486 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 COX7A2P14406 83 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 HOXB2P14652 356 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 RPS13P62277 151 aaKnown RBP22.44■■□□□ 1.18
MSX2-201ENST00000239243 FGL2Q14314 439 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 TMEM259Q4ZIN3 620 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 INTS11Q5TA45 600 aaKnown RBP22.44■■□□□ 1.18
MSX2-201ENST00000239243 ZBTB49Q6ZSB9 765 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 IL17RCQ8NAC3 791 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 MSLNLQ96KJ4 702 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 CIB1Q99828 191 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 CPPED1Q9BRF8 314 aaPredicted RBP22.44■■□□□ 1.18
MSX2-201ENST00000239243 SLC17A9Q9BYT1 436 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 TRIT1Q9H3H1 467 aaKnown RBP22.44■■□□□ 1.18
MSX2-201ENST00000239243 KAT8Q9H7Z6 458 aaKnown RBP22.44■■□□□ 1.18
MSX2-201ENST00000239243 SPATA7Q9P0W8 599 aa22.44■■□□□ 1.18
MSX2-201ENST00000239243 TDRKHQ9Y2W6 561 aaKnown RBP22.44■■□□□ 1.18
MSX2-201ENST00000239243 A0A1W2PQU0 124 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 A6NHS1 94 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 ETHE1O95571 254 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 ANXA4P09525 319 aaPredicted RBP22.43■■□□□ 1.18
MSX2-201ENST00000239243 PIM1P11309 404 aaPredicted RBP22.43■■□□□ 1.18
MSX2-201ENST00000239243 SOX11P35716 441 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 OR4F3Q6IEY1 312 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 PPP4R4Q6NUP7 873 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 GALNT18Q6P9A2 607 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 PHC3Q8NDX5 983 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 OR52E4Q8NGH9 312 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 GFM2Q969S9 779 aaKnown RBP22.43■■□□□ 1.18
MSX2-201ENST00000239243 PRPF18Q99633 342 aaKnown RBP22.43■■□□□ 1.18
MSX2-201ENST00000239243 TIMM29Q9BSF4 260 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 REXO4Q9GZR2 422 aaKnown RBP22.43■■□□□ 1.18
MSX2-201ENST00000239243 PREBQ9HCU5 417 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 PDP2Q9P2J9 529 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 FAM220BPB1ANY3 271 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 KCNJ13O60928 360 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 HOXB9P17482 250 aaPredicted RBP22.43■■□□□ 1.18
MSX2-201ENST00000239243 TIA1P31483 386 aaKnown RBP eCLIP22.43■■□□□ 1.18
MSX2-201ENST00000239243 PIK3CBP42338 1070 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 UGT8Q16880 541 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 DUOXA1Q1HG43 343 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 LPCAT2Q7L5N7 544 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 RAB42Q8N4Z0 105 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 C9orf16Q9BUW7 83 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 OSBPL11Q9BXB4 747 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 PCBD2Q9H0N5 130 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 DMRT3Q9NQL9 472 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 TM7SF3Q9NS93 570 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 SH2B3Q9UQQ2 575 aa22.43■■□□□ 1.18
MSX2-201ENST00000239243 RNGTTO60942 597 aaKnown RBP22.42■■□□□ 1.18
MSX2-201ENST00000239243 SCELO95171 688 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 HPCAL1P37235 193 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 PRKCQQ04759 706 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 CYP2A13Q16696 494 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 ANKRD46Q86W74 232 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 TDHQ8IZJ6 230 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 KRT78Q8N1N4 520 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 FAM120BQ96EK7 910 aaKnown RBP22.42■■□□□ 1.18
MSX2-201ENST00000239243 IKZF5Q9H5V7 419 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 YY1AP1Q9H869 796 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 TRPV5Q9NQA5 729 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 CROCCQ5TZA2 2017 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 SCAMP2O15127 329 aaKnown RBP22.42■■□□□ 1.18
MSX2-201ENST00000239243 TPST1O60507 370 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 DRD1P21728 446 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 PTPN6P29350 595 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 LTBRP36941 435 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 CLCN2P51788 898 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 ADPRHP54922 357 aa22.42■■□□□ 1.18
MSX2-201ENST00000239243 RAE1P78406 368 aaKnown RBP22.42■■□□□ 1.18
MSX2-201ENST00000239243 NRF1Q16656 503 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms