RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FEVQ99581 238 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 GAL3ST1Q99999 423 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 BEX1Q9HBH7 125 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 TMEM30AQ9NV96 361 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 PCDHB14Q9Y5E9 798 aa13.36□□□□□ -0.27
NFKB1-201ENST00000226574 TRBC2A0A5B9 178 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 MTMR11A4FU01 709 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 KRBA1A5PL33 1030 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 TMEM88BA6NKF7 163 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 ZNF195O14628 629 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CCL16O15467 120 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 EEDO75530 441 aaKnown RBP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 OR5F1O95221 314 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CCNYL3P0C7X3 344 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 HPGDP15428 266 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 BMP7P18075 431 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 BDKRB1P46663 353 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 PRKCZQ05513 592 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 SLBPQ14493 270 aaKnown RBP eCLIP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 TBC1D25Q3MII6 688 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 ANKRD34AQ69YU3 496 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 SYCE2Q6PIF2 218 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CCBE1Q6UXH8 406 aaPredicted RBP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 ARMCX6Q7L4S7 300 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 SPARTQ8N0X7 666 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 ZNF433Q8N7K0 673 aaPredicted RBP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CYB5D2Q8WUJ1 264 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 TRMT61BQ9BVS5 477 aaKnown RBP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 OR51V1Q9H2C8 321 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 TMEM39AQ9NV64 488 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CORO2BQ9UQ03 480 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 ILVBLA1L0T0 632 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 H0YAE9 185 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 MLLT10P55197 1068 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 RPS26P62854 115 aaKnown RBP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 AAK1Q2M2I8 961 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CYBRD1Q53TN4 286 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 LYPLAL1Q5VWZ2 237 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 NOXRED1Q6NXP6 359 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 NEK5Q6P3R8 708 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 KDELC1Q6UW63 502 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 USP43Q70EL4 1123 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 TCEANCQ8N8B7 351 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 SLC43A3Q8NBI5 491 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 POF1BQ8WVV4 589 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 SGCDQ92629 289 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 MS4A12Q9NXJ0 267 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 GLOD5A6NK44 160 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 ATG13O75143 517 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CNMDO75829 334 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CDRT1O95170 752 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 ATP4BP51164 291 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 SPCS2Q15005 226 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 KCTD11Q693B1 232 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 HMBOX1Q6NT76 420 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 MAMDC4Q6UXC1 1216 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CARM1Q86X55 608 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 LMNTD1Q8N9Z9 388 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 PROKR1Q8TCW9 393 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 TRUB1Q8WWH5 349 aaKnown RBP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 RIOK2Q9BVS4 552 aaKnown RBP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 C1QTNF1Q9BXJ1 281 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 OR2AG1Q9H205 316 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 GPR83Q9NYM4 423 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 MAT2BQ9NZL9 334 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 FBXW2Q9UKT8 454 aa13.35□□□□□ -0.27
NFKB1-201ENST00000226574 CNOT11Q9UKZ1 510 aaKnown RBP13.35□□□□□ -0.27
NFKB1-201ENST00000226574 IQCMA0A1B0GVH7 501 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 STK25O00506 426 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 AP3D1O14617 1153 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 SEMA3DO95025 777 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 EPOP01588 193 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 BCHEP06276 602 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 CLCN2P51788 898 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 CRB2Q5IJ48 1285 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 TSPAN33Q86UF1 283 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 LRRC17Q8N6Y2 441 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 PIGKQ92643 395 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 PLAC1Q9HBJ0 212 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 TREX1Q9NSU2 369 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 A0A096LPI6 279 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 C6orf47O95873 294 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 CD247P20963 164 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 C21orf33P30042 268 aaPredicted RBP13.34□□□□□ -0.27
NFKB1-201ENST00000226574 CSTF2P33240 577 aaKnown RBP eCLIP13.34□□□□□ -0.27
NFKB1-201ENST00000226574 RPS13P62277 151 aaKnown RBP13.34□□□□□ -0.27
NFKB1-201ENST00000226574 SEMA3AQ14563 771 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 DSG4Q86SJ6 1040 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 MRM3Q9HC36 420 aaKnown RBP13.34□□□□□ -0.27
NFKB1-201ENST00000226574 ZCCHC3Q9NUD5 404 aaKnown RBP13.34□□□□□ -0.27
NFKB1-201ENST00000226574 GULP1Q9UBP9 304 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 GPR45Q9Y5Y3 372 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 GMEB1Q9Y692 573 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 OR1F1O43749 312 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 NOS1APO75052 506 aaPredicted RBP13.34□□□□□ -0.27
NFKB1-201ENST00000226574 PRKAR1AP10644 381 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 PGFP49763 221 aa13.34□□□□□ -0.27
NFKB1-201ENST00000226574 TAS2R50P59544 299 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms