RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 RPS3P23396 243 aaKnown RBP eCLIP12.71□□□□□ -0.385e-7■■■□□ 15.5
PLOD3-201ENST00000223127 MAP2K4P45985 399 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 RGS4P49798 205 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 NCS1P62166 190 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 HSPA14Q0VDF9 509 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 PPP1R8Q12972 351 aaKnown RBP12.71□□□□□ -0.38
PLOD3-201ENST00000223127 GRIN2CQ14957 1233 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 CARTPTQ16568 116 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 PLA2G4EQ3MJ16 856 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.38
PLOD3-201ENST00000223127 TANGO2Q6ICL3 276 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 SPESP1Q6UW49 350 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 SBSNQ6UWP8 590 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 SYVN1Q86TM6 617 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 TXNDC15Q96J42 360 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 EGFL8Q99944 293 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 WRAP53Q9BUR4 548 aaKnown RBP12.71□□□□□ -0.38
PLOD3-201ENST00000223127 HOXD1Q9GZZ0 328 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 ZDHHC3Q9NYG2 299 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 PCTPQ9UKL6 214 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 TMPRSS11EQ9UL52 423 aa12.71□□□□□ -0.38
PLOD3-201ENST00000223127 UPK3BL1B0FP48 263 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 UPK3BL2E5RIL1 263 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 CST1P01037 141 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 RPS17P08708 135 aaKnown RBP12.7□□□□□ -0.38
PLOD3-201ENST00000223127 SERPINB10P48595 397 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 CDC20Q12834 499 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 ACOX1Q15067 660 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 GPRC6AQ5T6X5 926 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 LYPLAL1Q5VWZ2 237 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 P2RY8Q86VZ1 359 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 OR52B6Q8NGF0 335 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 PROKR1Q8TCW9 393 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 MCOLN3Q8TDD5 553 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 HTRA1Q92743 480 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 ACOX2Q99424 681 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 SLC28A3Q9HAS3 691 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 ZIM2Q9NZV7 527 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 DNAJB9Q9UBS3 223 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 ZNF225Q9UK10 706 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 IFT52Q9Y366 437 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 PCDHGB1Q9Y5G3 927 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 PIKFYVEQ9Y2I7 2098 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 LOC100130705A0A1B0GUX0 176 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 FFAR2O15552 330 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 HOXC11O43248 304 aaPredicted RBP12.7□□□□□ -0.38
PLOD3-201ENST00000223127 NFATC1O95644 943 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 DGKAP23743 735 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 CD6P30203 668 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 VIPR1P32241 457 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 GDF5P43026 501 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 MASP1P48740 699 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 ERVK-8P63133 956 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 BOP1Q14137 746 aaKnown RBP12.7□□□□□ -0.38
PLOD3-201ENST00000223127 LRIT3Q3SXY7 679 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 ZNF805Q5CZA5 627 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 TXNDC11Q6PKC3 985 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 SERPINA13PQ6UXR4 307 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 MACC1Q6ZN28 852 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 MBOAT1Q6ZNC8 495 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 TMEM179BQ7Z7N9 219 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 ADAMTSL2Q86TH1 951 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 AKAP14Q86UN6 197 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 CACUL1Q86Y37 369 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 DPP10Q8N608 796 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 BEND7Q8N7W2 519 aaPredicted RBP12.7□□□□□ -0.38
PLOD3-201ENST00000223127 NUDT8Q8WV74 236 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 ZNF566Q969W8 418 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 HBEGFQ99075 208 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 RBM4BQ9BQ04 359 aaKnown RBP12.7□□□□□ -0.38
PLOD3-201ENST00000223127 RBM4Q9BWF3 364 aaKnown RBP12.7□□□□□ -0.38
PLOD3-201ENST00000223127 SLIRPQ9GZT3 109 aaKnown RBP12.7□□□□□ -0.38
PLOD3-201ENST00000223127 DSN1Q9H410 356 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 FAM83DQ9H4H8 585 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 ERVK-18Q9QC07 812 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 INVSQ9Y283 1065 aa12.7□□□□□ -0.38
PLOD3-201ENST00000223127 E2F3O00716 465 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 HS6ST1O60243 411 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 NUAK1O60285 661 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 KATNA1O75449 491 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 CCDC159P0C7I6 412 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 CYP2A6P11509 494 aaPredicted RBP12.69□□□□□ -0.38
PLOD3-201ENST00000223127 CCR7P32248 378 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 TGFBR1P36897 503 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 NR4A2P43354 598 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 HSPA7P48741 367 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 CLPPQ16740 277 aaPredicted RBP12.69□□□□□ -0.38
PLOD3-201ENST00000223127 LYSMD2Q8IV50 215 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 ETFBKMTQ8IXQ9 262 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 CDYL2Q8N8U2 506 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 PSMA8Q8TAA3 256 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 FBLIM1Q8WUP2 373 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 FIG4Q92562 907 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 RORBQ92753 470 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 RIOK2Q9BVS4 552 aaKnown RBP12.69□□□□□ -0.38
PLOD3-201ENST00000223127 NUSAP1Q9BXS6 441 aaKnown RBP12.69□□□□□ -0.38
PLOD3-201ENST00000223127 CPNE5Q9HCH3 593 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 TBC1D3BA6NDS4 549 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 OR2AG2A6NM03 316 aa12.69□□□□□ -0.38
PLOD3-201ENST00000223127 AGAP14A8MT82 685 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms