RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 MSS51Q4VC12 460 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 GKN2Q86XP6 184 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 DDX1Q92499 740 aaKnown RBP13.24□□□□□ -0.29
LAMB1-201ENST00000222399 CNDP2Q96KP4 475 aaKnown RBP13.24□□□□□ -0.29
LAMB1-201ENST00000222399 EPYCQ99645 322 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 CST11Q9H112 138 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 A0A1W2PRG6 482 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 TRBC2A0A5B9 178 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 FABP12A6NFH5 140 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 TMEM233B4DJY2 109 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 NPPAP01160 153 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 HOXD13P35453 343 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 DNAJB13P59910 316 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 VLDLRP98155 873 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 SLC2A7Q6PXP3 512 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 RASSF6Q6ZTQ3 369 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 SLC9B2Q86UD5 537 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 NR4A3Q92570 626 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 PEBP4Q96S96 227 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 CD244Q9BZW8 370 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 ZNF304Q9HCX3 659 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 S100A9P06702 114 aaKnown RBP13.24□□□□□ -0.29
LAMB1-201ENST00000222399 SCRN3Q0VDG4 424 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 AGTRAPQ6RW13 159 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 DCUN1D3Q8IWE4 304 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 GRHL3Q8TE85 626 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 DENND1AQ8TEH3 1009 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 VRTNQ9H8Y1 702 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 EURLQ9NYK6 297 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 PFDN2Q9UHV9 154 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 RIMKLBQ9ULI2 386 aa13.24□□□□□ -0.29
LAMB1-201ENST00000222399 A0A075B6Q4 140 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ZNF726A6NNF4 738 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 PRKD3O94806 890 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SNX4O95219 450 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 PGLSO95336 258 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 AOC1P19801 751 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 CDK6Q00534 326 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 EMX2Q04743 252 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 NFATC2Q13469 925 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 GRASPQ7Z6J2 395 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 FAM46DQ8NEK8 389 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 OTUB2Q96DC9 234 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 NDC1Q9BTX1 674 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ALKBH4Q9NXW9 302 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 COL1A1P02452 1464 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 CICQ96RK0 1608 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SOCS5O75159 536 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ITGA10O75578 1167 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 CNTN5O94779 1100 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 RCBTB2O95199 551 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 CFIP05156 583 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 AZGP1P25311 298 aaKnown RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 DHPSP49366 369 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 DGKQP52824 942 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 MTTPP55157 894 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SMU1Q2TAY7 513 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 PLEKHS1Q5SXH7 462 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 PRPF38BQ5VTL8 546 aaKnown RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 CWF19L1Q69YN2 538 aaKnown RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 GALNTL5Q7Z4T8 443 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SIAH1Q8IUQ4 282 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 CANT1Q8WVQ1 401 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SMPDL3BQ92485 455 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 KCNJ9Q92806 393 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 TMBIM1Q969X1 311 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ZNF641Q96N77 438 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 KCNC2Q96PR1 638 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ZBTB26Q9HCK0 441 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SNTG1Q9NSN8 517 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 TRNAU1APQ9NX07 287 aaKnown RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 KCTD3Q9Y597 815 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SCDO00767 359 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ORC5O43913 435 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 HOXB2P14652 356 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ATP4BP51164 291 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 UFM1P61960 85 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 TSPAN5P62079 268 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 UPP1Q16831 310 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.23□□□□□ -0.291e-6■■□□□ 13.7
LAMB1-201ENST00000222399 PTCHD3Q3KNS1 767 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 PLEKHG6Q3KR16 790 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 GPRC6AQ5T6X5 926 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SYVN1Q86TM6 617 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ZNF366Q8N895 744 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SLC25A36Q96CQ1 311 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 MAPKAP1Q9BPZ7 522 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 EBF2Q9HAK2 575 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 A0A1W2PP18 115 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SLC22A1O15245 554 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 F7P08709 466 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ZNF20P17024 532 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 XRCC1P18887 633 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 CSTF2P33240 577 aaKnown RBP eCLIP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 SMSP52788 366 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 ZNF630Q2M218 657 aaPredicted RBP13.23□□□□□ -0.29
LAMB1-201ENST00000222399 PGBD2Q6P3X8 592 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 DNM1P34Q6PK57 102 aa13.23□□□□□ -0.29
LAMB1-201ENST00000222399 TMIGD1Q6UXZ0 262 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms