RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 KDELR2P33947 212 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 CLK3P49761 638 aaKnown RBP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 ARHGDIAP52565 204 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 GP2P55259 537 aaKnown RBP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 WNT3P56703 355 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 PHEXP78562 749 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 NPTX1Q15818 432 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 VMACQ2NL98 169 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 ZNF697Q5TEC3 545 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 SLC39A5Q6ZMH5 540 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 ARMCX6Q7L4S7 300 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 DDX53Q86TM3 631 aaKnown RBP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 HIPK1Q86Z02 1210 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 L3MBTL4Q8NA19 623 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 OR52J3Q8NH60 311 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 HERC2P3Q9BVR0 1158 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 TMEM121BQ9BXQ6 578 aaPredicted RBP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 HS3ST2Q9Y278 367 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 GMPPBQ9Y5P6 360 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 WNT6Q9Y6F9 365 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 GABRR3A8MPY1 467 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 GFYI3L273 518 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 SGTAO43765 313 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 CCNDBP1O95273 360 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 FADS2O95864 444 aaKnown RBP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 JUPP14923 745 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 PSMB9P28065 219 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 TGFBR1P36897 503 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 TMBIM6P55061 237 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 NTHL1P78549 312 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 SLC7A9P82251 487 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 GRSF1Q12849 480 aaKnown RBP eCLIP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 NR1D2Q14995 579 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 TEAD2Q15562 447 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 ZNF829Q3KNS6 432 aaPredicted RBP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 LY6G5CQ5SRR4 150 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.15□□□□□ -0.146e-7■■■■□ 25.7
CNOT3-201ENST00000221232 AGTRAPQ6RW13 159 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 RAVER1Q8IY67 606 aaKnown RBP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 PIK3C3Q8NEB9 887 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 ASZ1Q8WWH4 475 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 OR4K3Q96R72 315 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 TUBA1CQ9BQE3 449 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 RAD21L1Q9H4I0 556 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 RUBCNLQ9H714 662 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 ASIC5Q9NY37 505 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 BLOC1S6Q9UL45 172 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 PNMA8BQ9ULN7 279 aaPredicted RBP14.15□□□□□ -0.14
CNOT3-201ENST00000221232 MAN2B2Q9Y2E5 1009 aa14.15□□□□□ -0.14
CNOT3-201ENST00000221232 BOLA2-SMG1P6H3BVE0 249 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 FGF18O76093 207 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 ANXA4P09525 319 aaPredicted RBP14.14□□□□□ -0.15
CNOT3-201ENST00000221232 PRPS1L1P21108 318 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 ITGB8P26012 769 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 MAPK1P28482 360 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 HNMTP50135 292 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 METAP1P53582 386 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 SMU1Q2TAY7 513 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 B3GNT8Q7Z7M8 397 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 PTOV1Q86YD1 416 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 CROCCP3Q8IVE0 287 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 ZZZ3Q8IYH5 903 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 CPXM2Q8N436 756 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 KREMEN2Q8NCW0 462 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 DDHD1Q8NEL9 900 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 MCCC1Q96RQ3 725 aaPredicted RBP14.14□□□□□ -0.15
CNOT3-201ENST00000221232 TPT1P8Q9HAU6 139 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 IL1RAPQ9NPH3 570 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 SIRT5Q9NXA8 310 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 USE1Q9NZ43 259 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 FZD4Q9ULV1 537 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 SAMD4AQ9UPU9 718 aaKnown RBP14.14□□□□□ -0.15
CNOT3-201ENST00000221232 CHD7Q9P2D1 2997 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 COQ9O75208 318 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 NDUFS2O75306 463 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 FABP3P05413 133 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 JUNBP17275 347 aaPredicted RBP14.14□□□□□ -0.15
CNOT3-201ENST00000221232 OR1E2P47887 323 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 VBP1P61758 197 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 GRIN2CQ14957 1233 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 RASGEF1AQ8N9B8 481 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 TTC29Q8NA56 475 aaPredicted RBP14.14□□□□□ -0.15
CNOT3-201ENST00000221232 ZNF540Q8NDQ6 660 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 RAB2BQ8WUD1 216 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 BORCS5Q969J3 196 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 TMEM159Q96B96 161 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 TESCQ96BS2 214 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 LMLNQ96KR4 655 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 DUSP26Q9BV47 211 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 ASAH2Q9NR71 780 aa14.14□□□□□ -0.15
CNOT3-201ENST00000221232 IGLV3-16A0A075B6K0 115 aa14.13□□□□□ -0.15
CNOT3-201ENST00000221232 CFAP99D6REC4 459 aa14.13□□□□□ -0.15
CNOT3-201ENST00000221232 PLK4O00444 970 aa14.13□□□□□ -0.15
CNOT3-201ENST00000221232 VIPP01282 170 aa14.13□□□□□ -0.15
CNOT3-201ENST00000221232 MC1RQ01726 317 aa14.13□□□□□ -0.15
CNOT3-201ENST00000221232 GBX1Q14549 363 aa14.13□□□□□ -0.15
CNOT3-201ENST00000221232 ACOX1Q15067 660 aa14.13□□□□□ -0.15
CNOT3-201ENST00000221232 CATSPEREQ5SY80 951 aa14.13□□□□□ -0.15
CNOT3-201ENST00000221232 MPP7Q5T2T1 576 aa14.13□□□□□ -0.15
CNOT3-201ENST00000221232 CNKSR3Q6P9H4 555 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms