RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SLC38A4Q969I6 547 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 MRGPRX2Q96LB1 330 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 HYLS1Q96M11 299 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 RNF145Q96MT1 663 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 RNF121Q9H920 327 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 GLS2Q9UI32 602 aa13.24□□□□□ -0.29
GABPB1-201ENST00000220429 SH3D21A4FU49 640 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 B4DXG7 233 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 TLL1O43897 1013 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 LDOC1O95751 146 aaPredicted RBP13.23□□□□□ -0.29
GABPB1-201ENST00000220429 ALDH1A1P00352 501 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 MT-ND2P03891 347 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 MVKQ03426 396 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 ABRQ12979 859 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 NLRP8Q86W28 1048 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 ZNF683Q8IZ20 524 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 OR4D10Q8NGI6 311 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 OR9I1Q8NGQ6 314 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 UTP15Q8TED0 518 aaKnown RBP13.23□□□□□ -0.29
GABPB1-201ENST00000220429 FRS2Q8WU20 508 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 REPS1Q96D71 796 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 GPR137Q96N19 417 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 C1QTNF1Q9BXJ1 281 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 ATXN3LQ9H3M9 355 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 RHOJQ9H4E5 214 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 LDAHQ9H6V9 325 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 SLC2A6Q9UGQ3 507 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 MID2Q9UJV3 735 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 TPRKBQ9Y3C4 175 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 V9GYQ6 96 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 LOC100130705A0A1B0GUX0 176 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 RAB19A4D1S5 217 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 WASH4PA8MWX3 477 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 RFPL3O75679 317 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 PEX11BO96011 259 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 CA5AP35218 305 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 TIE1P35590 1138 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 MEOX2P50222 304 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 SLC35A2P78381 396 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 SP3Q02447 781 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 HYAL2Q12891 473 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 CLLU1Q5K131 121 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 ZNF691Q5VV52 312 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 KDELC2Q7Z4H8 507 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 DENND6AQ8IWF6 608 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 CNTN4Q8IWV2 1026 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 SPPL2BQ8TCT7 592 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 BPIFB1Q8TDL5 484 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 PMM1Q92871 262 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 DUSP21Q9H596 190 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 SMURF2Q9HAU4 748 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 NSMCE4AQ9NXX6 385 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 DTX4Q9Y2E6 619 aa13.23□□□□□ -0.29
GABPB1-201ENST00000220429 RPS10-NUDT3A0A1W2PQS6 291 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 NCK1P16333 377 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 SAT1P21673 171 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 CHRNA4P43681 627 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 TBX4P57082 545 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 KLHL12Q53G59 568 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 RANBP10Q6VN20 620 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 ZYG11AQ6WRX3 759 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 ZDHHC13Q8IUH4 622 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 TMEM151AQ8N4L1 468 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 PPHLN1Q8NEY8 458 aaKnown RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 OR6M1Q8NGM8 313 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 NPAS1Q99742 590 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 TTPALQ9BTX7 342 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 ACE2Q9BYF1 805 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 FBXO44Q9H4M3 255 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 PRDM5Q9NQX1 630 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 RPH3AQ9Y2J0 694 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 PCDHB5Q9Y5E4 795 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 A0A1B0GVM2 712 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 KHNYNO15037 678 aaKnown RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 CYP7B1O75881 506 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 TBX18O95935 607 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 GLAP06280 429 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 ARSAP15289 507 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 CHRM3P20309 590 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 CHMP24386 653 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 RECQLP46063 649 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 EFEMP1Q12805 493 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 CTBP1Q13363 440 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 DUSP6Q16828 381 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 SYT16Q17RD7 645 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 TUSC1Q2TAM9 212 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 MS4A13Q5J8X5 152 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 TSPYL5Q86VY4 417 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 CCDC117Q8IWD4 279 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 TIGD4Q8IY51 512 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 MINDY1Q8N5J2 469 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 GDPD1Q8N9F7 314 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 KBTBD8Q8NFY9 601 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 ASB15Q8WXK1 588 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 PYCR2Q96C36 320 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 FAM193BQ96PV7 902 aaPredicted RBP13.22□□□□□ -0.29
GABPB1-201ENST00000220429 UGT2B28Q9BY64 529 aa13.22□□□□□ -0.29
GABPB1-201ENST00000220429 RACGAP1Q9H0H5 632 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms